Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0042618 PREDICTED: pentatricopeptide repeat-containing protein At2g30100, chloroplastic isoform X1 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6580 LG-5 - View
Acer truncatum Atru.chr3.4145 chr3 + View
Actinidia chinensis Actinidia34467 Lachesis_group15 - View
Actinidia chinensis Actinidia23875 Lachesis_group9 + View
Arabidopsis lyrata AL4G24870 scaffold_4 + View
Avicennia marina MSTRG.12683 ScioBoG_17730_HRSCAF_17811 - View
Amaranthus hybridus Ah.08g215320 AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UR06JS arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1QT3IR arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT2G30100 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT5G04810.1)%3B Has 68862 Blast hits to 30982 proteins in 1167 species: Archae - 27%3B Bacteria - 7834%3B Metazoa - 26033%3B Fungi - 2446%3B Plants - 28670%3B Viruses - 2%3B Other Eukaryotes - 3850 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaC02g08056 ChrC02 - View
Brassica napus C04p58980 C04 + View
Brassica oleracea BolC4t27410H C4 + View
Brassica rapa BraA04t17817Z A04 + View
Beta vulgaris EL10Ac7g15887 PF13812 - Pentatricopeptide repeat domain (PPR_3) Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT54G0320 NC_044375.1 + View
Cicer arietinum L. Ca_14982_v3 Ca_LG5_v3 + View
Corylus avellana Haze_24381 Similar to At2g30100: Pentatricopeptide repeat-containing protein At2g30100, chloroplastic (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g14600 Pentatricopeptide repeat-containing protein At2g30100, chloroplastic chr1 + View
Citrus clementina Ciclev10028251m.g scaffold_8 + View
Carya illinoinensis CiPaw.13G073200 Chr13 - View
Carya illinoinensis CiPaw.14G056400 Chr14 - View
Citrullus lanatus ClCG02G019390 pentatricopeptide (PPR) repeat-containing protein LENGTH=503 CG_Chr02 - View
Cucumis melo MELO3C026835.2 Pentatricopeptide repeat-containing protein At2g30100, chloroplastic chr11 + View
Carica papaya Cpa.g.sc2.394 supercontig_2 - View
Chenopodium quinoa AUR62036246 At2g30100: Pentatricopeptide repeat-containing protein At2g30100, chloroplastic C_Quinoa_Scaffold_2528 + View
Chenopodium quinoa AUR62009700 At2g30100: Pentatricopeptide repeat-containing protein At2g30100, chloroplastic C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0004s1120 scaffold_4 + View
Cucumis sativus L. CsaV3_6G016010 Pentatricopeptide repeat-containing protein, chloroplastic chr6 - View
Daucus carota DCAR_007349 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv28672 GWHABJS00000010 + View
Durio zibethinus Duzib168G0722 NW_019168159.1 + View
Durio zibethinus Duzib170G1072 NW_019167871.1 + View
Erigeron canadensis ECA248G2088 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.B02230 Chr02 - View
Eutrema salsugineum Thhalv10016546m.g scaffold_10 + View
Fragaria x ananassa FAN11G0941 Fvb3-4 - View
Fragaria x ananassa FAN21G2904 Fvb3-2 + View
Fragaria x ananassa FAN25G3694 Fvb3-1 - View
Fragaria vesca FvH4_3g39290 Fvb3 + View
Gossypium hirsutum Gohir.A05G108000 A05 + View
Glycine max Glyma.11G167300 Gm11 - View
Glycine max Glyma.18G059800 Gm18 - View
Helianthus annuus HanXRQChr01g0011601 Probable pentatricopeptide (PPR) repeat-containing protein HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0146F.1_g065520 Hma1.2p1_0146F.1 + View
Lupinus albus Lalb_Chr18g0051231 Lalb_Chr18 + View
Lotus japonicus Lj6g0024894 chr6 - View
Lonicera japonica Lj2A1088G41 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_5_173260 Lsat_1_v8_lg_5 + View
Malus domestica MD03G1062600 pentatricopeptide (PPR) repeat-containing protein Chr03 - View
Malus domestica MD11G1066200 pentatricopeptide (PPR) repeat-containing protein Chr11 - View
Medicago truncatula Medtr3g465390 PPR domain protein chr3 + View
Nelumbo nucifera Nn2g13216 chr2 - View
Nelumbo nucifera Nn2g10947 chr2 - View
Punica granatum PGR102G0989 NC_045129.1 + View
Prunus persica Prupe.6G052600 Pp06 - View
Pisum sativum Psat5g157440 Pentatricopeptide (PPR) repeat profile. chr5LG3 - View
Populus trichocarpa Potri.009G075200 Chr09 + View
Phaseolus vulgaris Phvul.006G071400 Chr06 + View
Quercus lobata QL01p039597 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0070721 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim01G0239400 chr01 + View
Salix brachista Sabra09G0057100 GWHAAZH00000009 + View
Simmondsia chinensis Sc06g0008150 GWHAASQ00000006 + View
Schrenkiella parvula Sp4g12660 ch4-6 + View
Selenicereus undatus Hund05042 Scaffold_19641 - View
Trochodendron aralioides TAR369G0096 group18 - View
Trochodendron aralioides TAR636G1839 group1 - View
Theobroma cacao Thecc.09G353800 Pentatricopeptide repeat-containing protein Chromosome_9 + View
Trifolium pratense TPR.G32925 Tp57577_TGAC_v2_scaf_184 + View
Tripterygium wilfordii TWI79G1747 NC_052238.1 - View
Vaccinium macrocarpon vmacro14612 Similar to At2g30100: Pentatricopeptide repeat-containing protein At2g30100, chloroplastic (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G0160 CM024075.1 - View
Vitis vinifera GSVIVG01024686001 chr6 + View