Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 1.0e-162 576.6 285 100.0
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.0e-106 389.0 422 54.0
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 6.0e-102 374.8 355 58.9
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 5.0e-101 371.7 422 51.7
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 5.8e-97 358.2 422 50.0
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 8.3e-96 354.4 422 50.2
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 49.4
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 49.4
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 1.1e-95 354.0 423 50.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.6e-94 350.1 422 48.8
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.1e-94 349.7 422 48.8
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 2.7e-94 349.4 422 49.1
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 2.7e-94 349.4 422 48.3
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 6.0e-94 348.2 422 48.1
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 6.0e-94 348.2 422 47.9
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 7.8e-94 347.8 423 48.5
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.3e-93 347.1 422 47.9
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.7e-93 346.7 422 47.4
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 1.7e-93 346.7 422 48.6
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.7e-93 346.7 423 48.9
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 2.3e-93 346.3 422 48.8
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.3e-93 346.3 422 47.9
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.0e-93 345.9 422 47.6
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 3.0e-93 345.9 408 50.5
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 6.6e-93 344.7 422 48.6
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 6.6e-93 344.7 423 48.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 1.1e-92 344.0 422 49.1
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.1e-92 344.0 422 49.5
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 3.3e-92 342.4 426 49.1
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 3.3e-92 342.4 424 49.1
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 4.3e-92 342.0 422 48.1
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 4.3e-92 342.0 426 48.8
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 4.3e-92 342.0 422 47.9
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.5e-92 340.9 422 48.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 1.1e-90 337.4 423 47.5
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.4e-90 337.0 422 48.1
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.4e-90 337.0 423 47.0
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 1.8e-90 336.7 422 46.0
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.3e-90 336.3 423 47.5
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 3.1e-90 335.9 422 46.2
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 5.2e-90 335.1 423 48.0
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.2e-89 334.0 429 48.3
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.5e-89 333.6 423 48.0
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 2.6e-89 332.8 422 48.1
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 47.8
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 47.8
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 3.4e-89 332.4 423 46.6
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 9.9e-89 330.9 453 46.1
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.7e-88 330.1 423 45.9
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 3.7e-88 328.9 422 46.2
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.4e-88 328.2 423 47.0
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 8.3e-88 327.8 422 46.4
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.4e-87 326.2 423 46.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 4.1e-87 325.5 422 45.5
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.4e-87 325.1 422 46.4
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 5.4e-87 325.1 422 45.5
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 3.5e-86 322.4 422 45.5
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 4.6e-86 322.0 422 46.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 4.6e-86 322.0 423 44.7
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.7e-85 320.1 328 55.2
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 8.6e-85 317.8 324 55.2
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.5e-84 317.0 426 46.0
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 7.3e-84 314.7 422 46.2
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.1e-83 313.2 353 49.9
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.8e-83 312.8 423 45.2
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.1e-82 309.3 327 53.2
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 5.2e-82 308.5 423 44.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 8.9e-82 307.8 422 42.7
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.7e-80 303.5 423 42.6
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.2e-80 303.1 423 44.2
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 8.4e-80 301.2 328 53.7
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 1.1e-79 300.8 423 42.3
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.4e-79 300.4 423 43.0
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 2.4e-79 299.7 423 42.1
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.2e-79 299.3 340 50.9
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 4.2e-79 298.9 423 41.8
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 5.4e-79 298.5 325 53.5
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 9.2e-79 297.7 424 44.1
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 1.2e-78 297.4 327 51.4
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 4.6e-78 295.4 423 41.8
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 6.6e-77 291.6 421 42.8
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 8.7e-77 291.2 428 43.2
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 1.4e-74 283.9 421 41.1
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 9.9e-73 277.7 428 40.7
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.3e-72 277.3 426 41.1
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 2.9e-72 276.2 426 41.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.4e-71 273.1 429 40.1
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.4e-71 273.1 426 40.8
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 3.2e-71 272.7 429 40.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.2e-70 270.8 429 40.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.6e-70 270.4 421 41.1
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.6e-70 270.4 424 39.6
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 4.6e-70 268.9 427 40.0
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.0e-69 267.7 429 39.9
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 1.0e-69 267.7 429 39.9
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.5e-68 263.8 429 39.6
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 1.6e-62 243.8 362 40.3
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.3e-61 240.7 313 47.3
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.3e-61 240.0 260 51.5
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 5.1e-61 238.8 363 39.4
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 8.7e-61 238.0 355 41.1
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 3.4e-57 226.1 322 40.7
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 5.5e-47 192.2 243 46.5
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 6.5e-40 168.7 419 29.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.3e-37 160.2 199 46.7
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.3e-36 156.0 165 51.5
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.2e-33 147.9 97 71.1
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.9e-31 140.6 267 31.5
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.6e-28 130.2 127 52.8
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.9e-25 119.0 134 48.5
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 2.2e-24 117.1 365 26.0
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.8e-21 107.5 92 62.0
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 4.4e-20 102.8 351 25.1
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 3.8e-16 89.7 86 48.8
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.9e-15 87.4 85 49.4
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 3.4e-12 76.6 185 34.1
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-11 74.7 182 32.4
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 3.2e-07 60.1 67 41.8


User provided reference genes

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