Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.2346 chr10 - View
Actinidia chinensis Actinidia23155 Lachesis_group20 + View
Actinidia chinensis Actinidia11491 Lachesis_group21 + View
Actinidia chinensis Actinidia11631 Lachesis_group24 - View
Actinidia chinensis Actinidia29017 Lachesis_group3 + View
Arabidopsis lyrata AL8G34390 scaffold_8 + View
Avicennia marina MSTRG.18535 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.21263 ScioBoG_26769_HRSCAF_26899 - View
Aquilegia oxysepala Aqoxy4G03298 CHR04 - View
Arabidopsis thaliana AT5G58290 regulatory particle triple-A ATPase 3 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA%2C regulatory particle triple-A ATPase 3 (RPT3)%3B FUNCTIONS IN: ATPase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: proteasome regulatory particle%2C base subcomplex%2C proteasome complex%2C cell wall%2C nucleus%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA-type%2C conserved site (InterPro:IPR003960)%2C 26S proteasome subunit P45 (InterPro:IPR005937)%3B BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A (TAIR:AT4G29040.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR1127G188 AmTr_v1.0_scaffold00077 + View
Capsicum annuum CAN.G874.66 PGAv.1.6.scaffold874 + View
Cannabis sativa CANSAT54G1201 NC_044375.1 + View
Cicer arietinum L. Ca_15074_v3 Ca_LG5_v3 - View
Corylus avellana Haze_24483 Similar to 26S proteasome regulatory subunit 6B homolog (Solanum tuberosum OX%3D4113) 6 - View
Coffea canephora Cc01_g15400 26S protease regulatory subunit 6B chr1 - View
Citrus clementina Ciclev10003767m.g scaffold_5 + View
Carpinus fangiana Cfa011847 Cfa04 - View
Cardamine hirsuta CARHR272090 Cell division control protein 48 aaa family protein (Transitional endoplasmic reticulum atpase),putative Chr8 - View
Carya illinoinensis CiPaw.14G049200 3.6.4.8 - Proteasome ATPase / RP triple-A protein Chr14 + View
Carya illinoinensis CiPaw.13G062200 3.6.4.8 - Proteasome ATPase / RP triple-A protein Chr13 + View
Citrullus lanatus ClCG02G019000 26S protease regulatory subunit 6b, putative CG_Chr02 - View
Cucumis melo MELO3C019587.2 26S protease regulatory subunit 6B homolog chr11 - View
Carica papaya Cpa.g.sc2.273 supercontig_2 + View
Capsella rubella Carub.0008s1883 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) scaffold_8 + View
Davidia involucrata Dinv28747 GWHABJS00000010 - View
Erigeron canadensis ECA236G0481 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.N00715 scaffold_14 + View
Erythranthe guttata Migut.D00810 scaffold_4 + View
Eutrema salsugineum Thhalv10013708m.g 3.6.4.8 - Proteasome ATPase / RP triple-A protein scaffold_2 - View
Fragaria x ananassa FAN16G0778 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Fvb3-3 - View
Fragaria x ananassa FAN21G0514 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Fvb3-2 - View
Fragaria x ananassa FAN11G1333 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Fvb3-4 - View
Fragaria vesca FvH4_3g40850 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Fvb3 - View
Glycine max Glyma.18G050900 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Gm18 + View
Glycine max Glyma.11G199900 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Gm11 - View
Helianthus annuus HanXRQChr01g0027621 Probable ATPase, AAA-type, CDC48 protein HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0161F.1_g072070 Hma1.2p1_0161F.1 + View
Lupinus albus Lalb_Chr10g0103861 3.6.4.8 - Proteasome ATPase / RP triple-A protein Lalb_Chr10 - View
Lupinus albus Lalb_Chr17g0345661 3.6.4.8 - Proteasome ATPase / RP triple-A protein Lalb_Chr17 - View
Lupinus albus Lalb_Chr18g0054101 3.6.4.8 - Proteasome ATPase / RP triple-A protein Lalb_Chr18 + View
Lotus japonicus Lj6g0020148 3.6.4.8 - Proteasome ATPase / RP triple-A protein chr6 + View
Lonicera japonica Lj1A113G50 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_5_177280 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_99721 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Lsat_1_v8_lg_8 + View
Magnolia biondii MBI15_g32282_MAGBIO AED:0.27 Chr15 - View
Malus domestica MD03G1049000 regulatory particle triple-A ATPase 3 Chr03 + View
Malus domestica MD11G1051500 regulatory particle triple-A ATPase 3 Chr11 + View
Medicago truncatula Medtr3g062510 26S protease regulatory subunit 6B chr3 - View
Nelumbo nucifera Nn2g10243 chr2 + View
Nelumbo nucifera Nn5g26803 chr5 + View
Nicotiana tabacum Nitab4.5_0000105g0310 26S proteasome subunit P45, P-loop containing nucleoside triphosphate hydrolase, ATPase, AAA-type, conserved site, AAA+ ATPase domain, ATPase, AAA-type, core Nitab4.5_0000105 - View
Nicotiana tabacum Nitab4.5_0002902g0100 26S proteasome subunit P45, ATPase, AAA-type, conserved site, P-loop containing nucleoside triphosphate hydrolase, AAA+ ATPase domain, ATPase, AAA-type, core Nitab4.5_0002902 - View
Olea europaea Oeu011395.1 chr4 - View
Prunus persica Prupe.6G039300 K03063 - 26S proteasome regulatory subunit T3 (PSMC4, RPT3) Pp06 + View
Papaver somniferum PSO384G2110 NC_039368.1 - View
Papaver somniferum PSO339G0051 NC_039366.1 + View
Phaseolus vulgaris Phvul.006G080300 3.6.4.8 - Proteasome ATPase / RP triple-A protein Chr06 - View
Quercus lobata QL01p024313 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0073581 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0057900 chr13 + View
Striga asiatica SGA_v2.0_scaffold120G32999 scaffold120 - View
Salvia bowleyana SalBow2G3044 GWHASIU00000007 + View
Simmondsia chinensis Sc21g0004830 GWHAASQ00000021 + View
Sechium edule Sed0002106 LG05 - View
Sechium edule Sed0003519 LG01 - View
Solanum lycopersicum Solyc06g082630.4 26S protease regulatory subunit 6B-like protein (AHRD V3.3 *** A0A2G2WNW8_CAPBA) SL4.0ch06 - View
Schrenkiella parvula Sp6g19940 3.6.4.8 - Proteasome ATPase / RP triple-A protein ch6-6 + View
Solanum pennellii Sopen06g034030 26S protease regulatory subunit 6B homolog - Solanum tuberosum (Potato), 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA, | regulatory particle triple-A ATPase 3 (RPT3) | FUNCTIONS IN: ATPase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, cell wall, nucleus, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , 26S proteasome subunit P45 | BEST Arabidopsis thaliana protein match is: regulatory particle AAA-ATPase 2A Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400030476 26S protease regulatory subunit 6B homolog ST4.03ch06 - View
Trochodendron aralioides TAR369G0965 group18 + View
Trochodendron aralioides TAR623G0938 group7 + View
Trochodendron aralioides TAR633G0181 group2 - View
Trifolium pratense TPR.G13897 Tp57577_TGAC_v2_scaf_410 - View
Tripterygium wilfordii TWI31G0366 NC_052233.1 + View
Utricularia gibba unitig_747.g21441 unitig_747 + View
Vaccinium macrocarpon vmacro02865 Similar to 26S proteasome regulatory subunit 6B homolog (Solanum tuberosum OX%3D4113) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G2104 CM024075.1 + View
Vanilla planifolia HPP92_019047 26S protease regulatory subunit 6B homolog *** CM028158.1 + View
Vitis vinifera GSVIVG01024544001 chr6 - View