Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG1G23480 | LG-1 | + | View | |
Actinidia chinensis | Actinidia09295 | Lachesis_group5 | + | View | |
Arabidopsis lyrata | AL4G39540 | scaffold_4 | + | View | |
Avicennia marina | MSTRG.10802 | ScioBoG_13798_HRSCAF_13862 | - | View | |
Aquilegia oxysepala | Aqoxy1G00331 | CHR01 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.VNMU4U | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
Arabidopsis thaliana | AT2G41460 | apurinic endonuclease-redox protein apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease%2C and is involved in DNA repair. apurinic endonuclease-redox protein (ARP)%3B CONTAINS InterPro DOMAIN/s: AP endonuclease%2C family 1%2C conserved site (InterPro:IPR020848)%2C DNA-binding SAP (InterPro:IPR003034)%2C AP endonuclease%2C family 1 (InterPro:IPR000097)%2C AP endonuclease%2C family 1%2C binding site (InterPro:IPR020847)%2C Endonuclease/exonuclease/phosphatase (InterPro:IPR005135)%2C Exodeoxyribonuclease III xth (InterPro:IPR004808)%3B BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase (TAIR:AT3G60950.1)%3B Has 8976 Blast hits to 8966 proteins in 2340 species: Archae - 119%3B Bacteria - 5352%3B Metazoa - 387%3B Fungi - 388%3B Plants - 165%3B Viruses - 2%3B Other Eukaryotes - 2563 (source: NCBI BLink). | Chr2 | + | View |
Brassica napus | C04p69060 | C04 | + | View | |
Brassica napus | A04p31630 | A04 | + | View | |
Brassica napus | A03p23280 | A03 | + | View | |
Brassica napus | C03p27780 | C03 | + | View | |
Brassica oleracea | BolC4t28403H | C4 | + | View | |
Brassica oleracea | BolC3t15148H | C3 | + | View | |
Brassica rapa | BraA04t18621Z | A04 | + | View | |
Brassica rapa | BraA03t11547Z | A03 | + | View | |
Beta vulgaris | EL10Ac3g07159 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | Chr3_EL10_PGA_scaffold7 | - | View |
Capsicum annuum | CAN.G1237.2 | PGAv.1.6.scaffold1237 | + | View | |
Cannabis sativa | CANSAT80G0759 | NC_044372.1 | - | View | |
Corylus avellana | Haze_19751 | Similar to ARP: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic (Arabidopsis thaliana OX%3D3702) | 10 | - | View |
Coffea canephora | Cc06_g18370 | Apurinic endonuclease-redox protein | chr6 | - | View |
Citrus clementina | Ciclev10005485m.g | scaffold_9 | - | View | |
Carpinus fangiana | Cfa016753 | Cfa07 | + | View | |
Cardamine hirsuta | CARHR136580 | Exodeoxyribonuclease III | Chr4 | + | View |
Carya illinoinensis | CiPaw.09G042300 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | Chr09 | - | View |
Citrullus lanatus | ClCG10G015520 | DNA-(Apurinic or apyrimidinic site) lyase | CG_Chr10 | - | View |
Cucumis melo | MELO3C009829.2 | DNA-(apurinic or apyrimidinic site) lyase | chr04 | - | View |
Carica papaya | Cpa.g.sc120.9 | supercontig_120 | - | View | |
Chenopodium quinoa | AUR62026122 | ARP: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic | C_Quinoa_Scaffold_3792 | - | View |
Chenopodium quinoa | AUR62024530 | ARP: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic | C_Quinoa_Scaffold_2876 | - | View |
Capsella rubella | Carub.0004s2376 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | scaffold_4 | + | View |
Cucumis sativus L. | CsaV3_3G040940 | DNA-(apurinic or apyrimidinic site) lyase | chr3 | + | View |
Davidia involucrata | Dinv30296 | GWHABJS00000015 | - | View | |
Eucalyptus grandis | Eucgr.K01579 | Chr11 | - | View | |
Eutrema salsugineum | Thhalv10016487m.g | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | scaffold_10 | + | View |
Fragaria x ananassa | FAN05G4287 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | Fvb6-3 | + | View |
Glycine max | Glyma.10G105800 | PTHR22748//PTHR22748:SF8 - AP ENDONUCLEASE // SUBFAMILY NOT NAMED | Gm10 | + | View |
Lotus japonicus | Lj5g0010383 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | chr5 | + | View |
Lonicera japonica | Lj2A390T38 | GWHAAZE00000002 | - | View | |
Malus domestica | MD12G1086000 | apurinic endonuclease-redox protein | Chr12 | + | View |
Manihot esculenta | Manes.09G016000 | Chromosome09 | - | View | |
Nelumbo nucifera | Nn7g36440 | chr7 | - | View | |
Nicotiana tabacum | Nitab4.5_0000826g0250 | AP endonuclease 1, Endonuclease/exonuclease/phosphatase, AP endonuclease 1, conserved site | Nitab4.5_0000826 | - | View |
Nicotiana tabacum | Nitab4.5_0001618g0310 | Endonuclease/exonuclease/phosphatase, AP endonuclease 1, AP endonuclease 1, conserved site | Nitab4.5_0001618 | - | View |
Olea europaea | Oeu023137.3 | chr17 | - | View | |
Petunia axillaris | Peaxi162Scf00130g01016 | DNA-(apurinic or apyrimidinic site) lyase | Peaxi162Scf00130 | - | View |
Prunus persica | Prupe.7G050000 | Pp07 | + | View | |
Papaver somniferum | PSO339G1912 | NC_039366.1 | + | View | |
Populus trichocarpa | Potri.006G045601 | PTHR22748//PTHR22748:SF8 - AP ENDONUCLEASE // SUBFAMILY NOT NAMED | Chr06 | + | View |
Populus trichocarpa | Potri.016G042000 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | Chr16 | + | View |
Phaseolus vulgaris | Phvul.007G249300 | Chr07 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0484441 | RcHm_v2.0_Chr3 | - | View | |
Rhododendron simsii | Rhsim03G0031100 | chr03 | - | View | |
Striga asiatica | SGA_v2.0_scaffold94G28513 | scaffold94 | + | View | |
Salix brachista | Sabra16G0047700 | GWHAAZH00000016 | + | View | |
Simmondsia chinensis | Sc13g0001490 | GWHAASQ00000013 | + | View | |
Solanum lycopersicum | Solyc04g016530.3 | DNA-(apurinic or apyrimidinic site) lyase (AHRD V3.3 *** A0A2G3CD81_CAPCH) | SL4.0ch04 | - | View |
Schrenkiella parvula | Sp4g23730 | K01142 - exodeoxyribonuclease III (E3.1.11.2, xthA) | ch4-6 | + | View |
Solanum pennellii | Sopen04g008610 | apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair. | apurinic endonuclease-redox protein (ARP) | CONTAINS InterPro DOMAIN/s: DNA-binding SAP , AP endonuclease, family 1, binding site , Exodeoxyribonuclease III xth , Endonuclease/exonuclease/phosphatase | BEST Arabidopsis thaliana protein match is: C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase | Spenn-ch04 | - | View |
Solanum tuberosum | PGSC0003DMG402012723 | Apurinic endonuclease-redox protein | ST4.03ch04 | - | View |
Selenicereus undatus | Hund19124 | Scaffold_33673 | + | View | |
Trochodendron aralioides | TAR636G3531 | group1 | + | View | |
Theobroma cacao | Thecc.05G145200 | Apurinic endonuclease-redox protein | Chromosome_5 | + | View |
Vaccinium macrocarpon | vmacro21954 | Similar to ARP: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vitis vinifera | GSVIVG01033553001 | chr8 | + | View |