Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0008078 Histone H3.3 [Arabidopsis thaliana] Chr4 + View
CSS0032966 hypothetical protein CARUB_v10002094mg, partial [Capsella rubella] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G16640 LG-1 + View
Aethionema arabicum Aa31LG6G15180 LG-6 + View
Actinidia chinensis Actinidia30792 Lachesis_group28 + View
Arabidopsis lyrata AL6G20890 scaffold_6 - View
Arabidopsis lyrata AL7G12340 scaffold_7 - View
Avicennia marina MSTRG.3757 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.2583 ScioBoG_102835_HRSCAF_103059 - View
Avicennia marina MSTRG.15724 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.03g142000 AmaHy_arrow1_Scaffold_3 + View
Arabidopsis thaliana AT4G40030 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleosome%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10980.1)%3B Has 14600 Blast hits to 14592 proteins in 7243 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 10603%3B Fungi - 2037%3B Plants - 1258%3B Viruses - 0%3B Other Eukaryotes - 702 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT5G10390 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: chloroplast%2C nucleosome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H3 (InterPro:IPR000164)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G10400.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaNung00934 Contig372 - View
Brassica carinata BcaB08g37111 ChrB08 + View
Brassica carinata BcaC04g19307 ChrC04 + View
Brassica napus C09p67010 C09 + View
Brassica napus C01p01080 C01 - View
Brassica napus A01p00950 A01 - View
Brassica napus A02p43900 A02 - View
Brassica oleracea BolC9t59474H C9 + View
Brassica oleracea BolC1t00105H C1 - View
Brassica rapa BraA10t44770Z A10 + View
Brassica rapa BraA01t00093Z A01 - View
Capsicum annuum CAN.G905.16 PGAv.1.6.scaffold905 + View
Cannabis sativa CANSAT01G2513 NC_044373.1 - View
Corylus avellana Haze_18267 Similar to OsI_011536: Histone H3.3 (Oryza sativa subsp. indica OX%3D39946) 7 + View
Corylus avellana Haze_24856 Similar to OsI_011536: Histone H3.3 (Oryza sativa subsp. indica OX%3D39946) 8 + View
Coffea canephora Cc07_g14640 Histone H3.3 chr7 + View
Ceratophyllum demersum CDE10G0796 8 + View
Cardamine hirsuta CARHR246630 Histone H3 Chr7 + View
Carya illinoinensis CiPaw.03G145400 K11253 - histone H3 (H3) Chr03 - View
Carya illinoinensis CiPaw.04G103300 K11253 - histone H3 (H3) Chr04 - View
Carya illinoinensis CiPaw.15G046400 K11253 - histone H3 (H3) Chr15 + View
Cucumis melo MELO3C017598.2 Histone H3 chr07 + View
Cucumis melo MELO3C011045.2 Histone H3 chr03 + View
Carica papaya Cpa.g.sc55.77 supercontig_55 + View
Carica papaya Cpa.g.sc36.173 supercontig_36 - View
Chenopodium quinoa AUR62027210 Histone H3.3 C_Quinoa_Scaffold_2924 + View
Chenopodium quinoa AUR62003258 Histone H3.3 C_Quinoa_Scaffold_1000 - View
Capsella rubella Carub.0006s0886 K11253 - histone H3 (H3) scaffold_6 - View
Capsella rubella Carub.0007s0200 K11253 - histone H3 (H3) scaffold_7 - View
Cucumis sativus L. CsaV3_4G004660 Histone H3 chr4 - View
Cucumis sativus L. CsaV3_2G029860 Histone H3 chr2 - View
Cucumis sativus L. CsaV3_UNG131020 Histone H3 scaffold66 - View
Cucumis sativus L. CsaV3_UNG221510 Histone H3 scaffold69 + View
Daucus carota DCAR_003470 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv07069 GWHABJS00000011 - View
Davidia involucrata Dinv08859 GWHABJS00000021 + View
Davidia involucrata Dinv13230 GWHABJS00000014 + View
Durio zibethinus Duzib187G1389 NW_019167860.1 - View
Durio zibethinus Duzib093G0956 NW_019167937.1 - View
Durio zibethinus Duzib264G0082 NW_019167960.1 - View
Durio zibethinus Duzib147G1370 NW_019168470.1 - View
Durio zibethinus Duzib116G0746 NW_019167949.1 + View
Erigeron canadensis ECA247G3525 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.I00535 Chr09 - View
Erythranthe guttata Migut.H02334 scaffold_8 + View
Eutrema salsugineum Thhalv10026962m.g K11253 - histone H3 (H3) scaffold_1 - View
Fragaria x ananassa FAN28G2591 K11253 - histone H3 (H3) Fvb1-1 - View
Fragaria x ananassa FAN08G2128 K11253 - histone H3 (H3) Fvb5-3 - View
Fragaria x ananassa FAN23G0039 K11253 - histone H3 (H3) Fvb1-3 + View
Fragaria x ananassa FAN13G1210 K11253 - histone H3 (H3) Fvb5-2 + View
Fragaria x ananassa FAN04G1013 K11253 - histone H3 (H3) Fvb5-4 + View
Fragaria vesca FvH4_5g36680 K11253 - histone H3 (H3) Fvb5 + View
Fragaria vesca FvH4_1g20270 K11253 - histone H3 (H3) Fvb1 + View
Gossypium hirsutum Gohir.A02G129500 K11253 - histone H3 (H3) A02 - View
Gossypium hirsutum Gohir.D05G226600 K11253 - histone H3 (H3) D05 + View
Gossypium hirsutum Gohir.A05G223800 K11253 - histone H3 (H3) A05 + View
Gossypium hirsutum Gohir.D03G040300 K11253 - histone H3 (H3) D03 - View
Glycine max Glyma.11G241702 K11253 - histone H3 (H3) Gm11 - View
Glycine max Glyma.18G015200 K11253 - histone H3 (H3) Gm18 + View
Gossypium raimondii Gorai.009G234200 Chr09 + View
Gossypium raimondii Gorai.003G041300 Chr03 - View
Hydrangea macrophylla Hma1.2p1_0019F.1_g013760 Hma1.2p1_0019F.1 - View
Lotus japonicus Lj6g0010159 K11253 - histone H3 (H3) chr6 + View
Lonicera japonica Lj4C899T8 GWHAAZE00000004 - View
Lonicera japonica Lj2C540T8 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_1_3221 Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_9_73101 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI05_g22324_MAGBIO AED:0.13 Chr05 - View
Magnolia biondii MBI02_g33228_MAGBIO AED:0.27 Chr02 + View
Malus domestica MD01G1035300 Histone superfamily protein Chr01 - View
Malus domestica MD08G1187800 Histone superfamily protein Chr08 - View
Malus domestica MD15G1373700 Histone superfamily protein Chr15 - View
Malus domestica MD15G1320600 Histone superfamily protein Chr15 + View
Manihot esculenta Manes.18G064500 Chromosome18 + View
Nelumbo nucifera Nn1g05448 chr1 - View
Nelumbo nucifera Nn5g30010 chr5 + View
Nicotiana tabacum Nitab4.5_0000241g0210 Pentatricopeptide repeat, WEB family, Histone-fold, Histone H3, Histone core Nitab4.5_0000241 + View
Olea europaea Oeu056640.1 chr18 - View
Olea europaea Oeu015880.1 chr7 - View
Olea europaea Oeu002161.1 chr14 + View
Oryza sativa ssp. japonica Os04g0450800 H3.2-type histone H3 protein, Salt stress response Similar to Histone H3. chr04 + View
Punica granatum PGR102G1906 NC_045129.1 + View
Punica granatum PGR004G1082 NC_045131.1 - View
Prunus persica Prupe.6G192700 K11253 - histone H3 (H3) Pp06 - View
Prunus persica Prupe.1G522300 K11253 - histone H3 (H3) Pp01 - View
Papaver somniferum PSO447G0217 NW_020621936.1 - View
Papaver somniferum PSO541G3364 NC_039363.1 + View
Papaver somniferum PSO675G6001 NC_039358.1 + View
Populus trichocarpa Potri.005G072300 K11253 - histone H3 (H3) Chr05 + View
Populus trichocarpa Potri.002G100200 K11253 - histone H3 (H3) Chr02 - View
Populus trichocarpa Potri.007G096700 K11253 - histone H3 (H3) Chr07 - View
Phaseolus vulgaris Phvul.001G253700 K11253 - histone H3 (H3) Chr01 - View
Quercus lobata QL06p048178 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0112411 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim07G0204500 chr07 - View
Rhododendron simsii Rhsim06G0078200 chr06 + View
Rhododendron simsii Rhsim08G0013300 chr08 - View
Striga asiatica SGA_v2.0_scaffold108G30893 scaffold108 - View
Salvia bowleyana SalBow3G1175 GWHASIU00000006 + View
Salvia bowleyana SalBow3G3400 GWHASIU00000006 + View
Salvia bowleyana SalBow5G0196 GWHASIU00000003 - View
Salix brachista Sabra07G0080000 GWHAAZH00000007 - View
Simmondsia chinensis Sc16g0000250 GWHAASQ00000016 - View
Simmondsia chinensis Sc03g0000140 GWHAASQ00000003 - View
Sechium edule Sed0005536 LG04 - View
Solanum lycopersicum Solyc05g051500.4 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) SL4.0ch05 + View
Solanum lycopersicum Solyc11g010230.2 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) SL4.0ch11 - View
Solanum lycopersicum Solyc04g074580.1 Histone H3 (AHRD V3.3 *** A0A2K1J132_PHYPA) SL4.0ch04 - View
Schrenkiella parvula Sp7g35830 K11253 - histone H3 (H3) ch7-6 + View
Schrenkiella parvula Sp6g33050 K11253 - histone H3 (H3) ch6-6 + View
Solanum pennellii Sopen11g005010 Histone superfamily protein | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleosome | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Histone H3 , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch11 - View
Solanum pennellii Sopen05g029910 Histone superfamily protein | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleosome assembly | LOCATED IN: nucleosome | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 16 growth stages | CONTAINS InterPro DOMAIN/s: Histone H3 , Histone-fold , Histone core | BEST Arabidopsis thaliana protein match is: Histone superfamily protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400016793 Histone H3.3 ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400030832 Histone H3.3 ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400016151 Histone H3.3 ST4.03ch11 + View
Selenicereus undatus Hund16558 Scaffold_33677 + View
Selenicereus undatus Hund14103 Scaffold_33679 + View
Trochodendron aralioides TAR625G1271 group4 - View
Trochodendron aralioides TAR381G1054 group11 + View
Trochodendron aralioides TAR376G0545 group14 - View
Trochodendron aralioides TAR628G1333 group5 - View
Theobroma cacao Thecc.08G102900 Histone superfamily protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104798809 LOW QUALITY PROTEIN: histone H3.2 NW_010960188.1 + View
Tripterygium wilfordii TWI74G0019 NC_052234.1 + View
Tripterygium wilfordii TWI77G0845 NC_052236.1 + View
Tripterygium wilfordii TWI53G1434 NC_052244.1 - View
Vaccinium macrocarpon vmacro18580 Similar to Histone H3.3 (Vitis vinifera OX%3D29760) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro04713 Similar to Histone H3.3 (Vitis vinifera OX%3D29760) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro21294 Similar to Histone H3.3 (Vitis vinifera OX%3D29760) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3597 CM024070.1 - View
Vitis vinifera GSVIVG01003423001 chr7 - View