Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0005769 unnamed protein product [Vitis vinifera] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.206 chr2 + View
Acer truncatum Atru.chr12.1623 chr12 - View
Actinidia chinensis Actinidia16899 Lachesis_group12 + View
Actinidia chinensis Actinidia01676 Lachesis_group7 - View
Avicennia marina MSTRG.20350 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MLT6T2 PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a mitochondria-localized pentatricopeptide repeat protein PGN. Functions in defense against necrotrophic fungi and abiotic stress tolerance. Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1)%3B Has 40728 Blast hits to 13683 proteins in 261 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 114%3B Fungi - 83%3B Plants - 40006%3B Viruses - 0%3B Other Eukaryotes - 517 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB07g31128 ChrB07 + View
Cannabis sativa CANSAT54G0262 NC_044375.1 - View
Cannabis sativa CANSAT54G0601 NC_044375.1 + View
Cicer arietinum L. Ca_01923_v3 Ca_LG1_v3 + View
Corylus avellana Haze_04026 Similar to PCMP-H69: Pentatricopeptide repeat-containing protein At1g56690, mitochondrial (Arabidopsis thaliana OX%3D3702) 2 - View
Ceratophyllum demersum CDE11G0777 9 - View
Davidia involucrata Dinv30912 GWHABJS00000002 + View
Davidia involucrata Dinv24486 GWHABJS00000005 - View
Erigeron canadensis ECA240G4549 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.H01305 Chr08 - View
Fragaria x ananassa FAN09G2266 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Gossypium hirsutum Gohir.A12G123200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A12 + View
Glycine max Glyma.20G094700 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm20 + View
Glycine max Glyma.10G145732 PF01535 - PPR repeat (PPR) Gm10 + View
Hydrangea macrophylla Hma1.2p1_0052F.1_g030650 Hma1.2p1_0052F.1 + View
Lupinus albus Lalb_Chr02g0147741 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr02 - View
Lupinus albus Lalb_Chr06g0167401 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr06 + View
Lonicera japonica Lj5C325T5 GWHAAZE00000005 + View
Malus domestica MD04G1184300 Pentatricopeptide repeat (PPR) superfamily protein Chr04 - View
Manihot esculenta Manes.09G177100 Chromosome09 - View
Medicago truncatula Medtr1g084570 PPR containing plant-like protein chr1 - View
Oryza sativa ssp. japonica Os03g0307900 Conserved hypothetical protein. chr03 + View
Punica granatum PGR031G0639 NC_045127.1 - View
Papaver somniferum PSO732G0540 NW_020620714.1 + View
Papaver somniferum PSO144G0170 NW_020623156.1 - View
Populus trichocarpa Potri.013G005400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr13 - View
Rhododendron simsii Rhsim05G0164600 chr05 - View
Salix brachista Sabra13G0004400 GWHAAZH00000013 - View
Solanum pennellii Sopen01g044290 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 + View
Solanum pennellii Sopen03g016080 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400038092 Conserved gene of unknown function ST4.03ch01 + View
Trochodendron aralioides TAR633G2211 group2 - View
Tarenaya hassleriana THA.LOC104818747 pentatricopeptide repeat-containing protein At5g66520-like NW_010966177.1 + View
Tripterygium wilfordii TWI56G0715 NC_052242.1 - View
Vaccinium macrocarpon vmacro01583 Similar to PCMP-E64: Putative pentatricopeptide repeat-containing protein At1g56570 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01031292001 chr14 - View