Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0020088 PREDICTED: pentatricopeptide repeat-containing protein At4g33990 [Vitis vinifera] Chr4 - View
CSS0025522 PREDICTED: pentatricopeptide repeat-containing protein At2g37320-like [Populus euphratica] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G22630 LG-5 - View
Acer truncatum Atru.BG.114.p chr3 - View
Acer truncatum Atru.BG.217.p chr8 - View
Acer truncatum Atru.chr8.2510 chr8 + View
Actinidia chinensis Actinidia35116 Lachesis_group2 + View
Actinidia chinensis Actinidia05283 Lachesis_group20 - View
Actinidia chinensis Actinidia18905 Lachesis_group9 + View
Actinidia chinensis Actinidia38240 Lachesis_group3 + View
Actinidia chinensis Actinidia13116 Lachesis_group0 - View
Arabidopsis lyrata AL4G33690 scaffold_4 - View
Arabidopsis lyrata AL5G34270 scaffold_5 + View
Avicennia marina MSTRG.5718 ScioBoG_102839_HRSCAF_103093 + View
Aquilegia oxysepala Aqoxy2G01937 CHR02 + View
Aquilegia oxysepala Aqoxy4G03105 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.26WQCY PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT2G37310 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 41005 Blast hits to 14175 proteins in 268 species: Archae - 2%3B Bacteria - 17%3B Metazoa - 83%3B Fungi - 122%3B Plants - 40263%3B Viruses - 0%3B Other Eukaryotes - 518 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G53360 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1)%3B Has 50551 Blast hits to 14033 proteins in 266 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 180%3B Fungi - 93%3B Plants - 49461%3B Viruses - 0%3B Other Eukaryotes - 804 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g00284 ChrB01 - View
Brassica carinata BcaB06g28983 ChrB06 + View
Brassica napus A09p46370 A09 + View
Brassica napus A05p08600 A05 - View
Brassica napus C04p10690 C04 - View
Brassica napus C08p28700 C08 + View
Brassica oleracea BolC4t22662H C4 - View
Brassica oleracea BolC8t50474H C8 + View
Brassica rapa BraA09t40102Z A09 + View
Brassica rapa BraA05t19828Z A05 - View
Cannabis sativa CANSAT25G2161 NC_044370.1 - View
Cannabis sativa CANSAT54G2425 NC_044375.1 + View
Cicer arietinum L. Ca_18543_v3 Ca_LG6_v3 + View
Corylus avellana Haze_20684 Similar to PCMP-E49: Pentatricopeptide repeat-containing protein At2g37310 (Arabidopsis thaliana OX%3D3702) 10 - View
Citrus clementina Ciclev10011246m.g scaffold_6 - View
Citrus clementina Ciclev10013887m.g scaffold_6 - View
Cardamine hirsuta CARHR132270 Pentatricopeptide repeat-containing protein Chr4 - View
Carya illinoinensis CiPaw.09G185200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 - View
Carya illinoinensis CiPaw.11G068000 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr11 + View
Cucumis melo MELO3C033474.2 Pentatricopeptide repeat-containing protein chr08 + View
Capsella rubella Carub.0004s1922 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 - View
Capsella rubella Carub.0005s1991 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 + View
Cucumis sativus L. CsaV3_3G035260 Pentatricopeptide repeat-containing protein chr3 + View
Davidia involucrata Dinv11818 GWHABJS00000009 + View
Davidia involucrata Dinv17093 GWHABJS00000007 - View
Davidia involucrata Dinv35680 GWHABJS00000015 + View
Durio zibethinus Duzib128G0523 NW_019168481.1 + View
Durio zibethinus Duzib093G1532 NW_019167937.1 - View
Eucalyptus grandis Eucgr.K03189 Chr11 - View
Eucalyptus grandis Eucgr.A01207 Chr01 + View
Erythranthe guttata Migut.L01645 scaffold_12 + View
Eutrema salsugineum Thhalv10010938m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_16 - View
Eutrema salsugineum Thhalv10016362m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 - View
Fragaria x ananassa FAN02G2208 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 - View
Fragaria x ananassa FAN05G2118 PF00646//PF01535//PF13041 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-3 - View
Fragaria x ananassa FAN05G4467 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-3 - View
Fragaria x ananassa FAN02G1390 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 + View
Fragaria x ananassa FAN14G0239 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-1 + View
Fragaria x ananassa FAN14G0917 PF00646//PF01535//PF13041//PF13639 - F-box domain (F-box) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Ring finger domain (zf-RING_2) Fvb6-1 - View
Fragaria x ananassa FAN09G3649 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-2 + View
Fragaria vesca FvH4_6g14840 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6 - View
Gossypium hirsutum Gohir.A09G160100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A09 + View
Gossypium hirsutum Gohir.D09G155700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D09 + View
Glycine max Glyma.10G047150 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm10 + View
Glycine max Glyma.03G178400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm03 + View
Glycine max Glyma.08G159033 PF01535 - PPR repeat (PPR) Gm08 - View
Gossypium raimondii Gorai.006G177200 Chr06 + View
Helianthus annuus HanXRQChr14g0454001 Probable ribosomal S17 family protein HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0111F.1_g053460 Hma1.2p1_0111F.1 - View
Lupinus albus Lalb_Chr20g0117721 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr20 + View
Lupinus albus Lalb_Chr20g0112871 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr20 - View
Lotus japonicus Lj5g0019104 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr5 - View
Lonicera japonica Lj2C101T1 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_32200 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_1_66120 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_1 + View
Magnolia biondii MBI05_g23377_MAGBIO AED:0.02 Chr05 - View
Malus domestica MD12G1130100 Pentatricopeptide repeat (PPR) superfamily protein Chr12 - View
Medicago truncatula Medtr7g100810 pentatricopeptide (PPR) repeat protein chr7 + View
Medicago truncatula Medtr1g067280 PPR containing plant-like protein chr1 - View
Medicago truncatula Medtr1g116000 transmembrane protein, putative chr1 - View
Nelumbo nucifera Nn2g12817 chr2 + View
Nelumbo nucifera Nn2g10561 chr2 + View
Oryza sativa ssp. japonica Os03g0283500 Pentatricopeptide repeat domain containing protein. chr03 - View
Punica granatum PGR044G2592 NC_045134.1 + View
Prunus persica Prupe.6G245400 Pp06 + View
Pisum sativum Psat3g044320 PPR repeat family chr3LG5 - View
Papaver somniferum PSO229G0075 NW_020650526.1 + View
Populus trichocarpa Potri.016G082200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr16 - View
Phaseolus vulgaris Phvul.001G173400 Chr01 - View
Quercus lobata QL07p045871 7 - View
Quercus lobata QL08p059001 8 + View
Rosa chinensis RcHm_v2.0_Chr3g0468071 RcHm_v2.0_Chr3 - View
Rosa chinensis RcHm_v2.0_Chr1g0383021 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr3g0468941 RcHm_v2.0_Chr3 + View
Striga asiatica SGA_v2.0_scaffold75G24882 scaffold75 - View
Sechium edule Sed0019936 LG02 + View
Sechium edule Sed0011490 LG03 + View
Sechium edule Sed0028213 LG05 + View
Schrenkiella parvula Sp4g19630 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 - View
Schrenkiella parvula Sp5g08990 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch5-1 - View
Solanum tuberosum PGSC0003DMG400002025 Pentatricopeptide repeat-containing protein ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400008944 Bipolar kinesin KRP-130 ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400010990 Conserved gene of unknown function ST4.03ch10 - View
Trochodendron aralioides TAR623G1286 group7 - View
Trochodendron aralioides TAR369G0483 group18 + View
Theobroma cacao Thecc.05G049800 Tetratricopeptide repeat-like superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104805348 pentatricopeptide repeat-containing protein At2g37310 NW_010960187.1 - View
Tripterygium wilfordii TWI53G0040 NC_052244.1 + View
Vigna mungo VMungo1383G3471 CM024070.1 + View
Zea mays Zm00001eb012970 Zm00001e001278 Pentatricopeptide repeat-containing protein 1 - View