Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000117 PREDICTED: U-box domain-containing protein 9-like [Sesamum indicum] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G17930 LG-5 + View
Acer truncatum Atru.chr6.1470 chr6 + View
Actinidia chinensis Actinidia09450 Lachesis_group15 + View
Actinidia chinensis Actinidia23781 Lachesis_group9 - View
Actinidia chinensis Actinidia30025 Lachesis_group24 + View
Arabidopsis lyrata AL3G18660 scaffold_3 + View
Avicennia marina MSTRG.20988 ScioBoG_26769_HRSCAF_26899 + View
Avicennia marina MSTRG.18818 ScioBoG_22153_HRSCAF_22259 - View
Amaranthus hybridus Ah.08g218820 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy2G03967 CHR02 - View
Arabidopsis thaliana AT3G07360 plant U-box 9 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 9 (PUB9)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: protein ubiquitination%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1)%3B Has 3234 Blast hits to 3002 proteins in 224 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 312%3B Fungi - 206%3B Plants - 2395%3B Viruses - 3%3B Other Eukaryotes - 302 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g29733 ChrC05 - View
Brassica carinata BcaB04g21293 ChrB04 - View
Brassica napus A03p35210 A03 + View
Brassica napus C05p59930 C05 - View
Brassica napus A05p40840 A05 - View
Brassica napus C03p42810 C03 + View
Brassica napus BNapus_Darmor_BZH_scaffold_109p00070 BNapus_Darmor_BZH_scaffold_109 - View
Brassica oleracea BolC3t16549H C3 + View
Brassica oleracea BolC5t34649H C5 - View
Brassica rapa BraA03t12699Z A03 + View
Brassica rapa BraA01t04384Z A01 - View
Brassica rapa BraA05t22814Z A05 - View
Beta vulgaris EL10Ac7g17972 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Chr7_EL10_PGA_scaffold5 + View
Cannabis sativa CANSAT01G0410 NC_044373.1 - View
Cicer arietinum L. Ca_07491_v3 Ca_LG3_v3 - View
Coffea canephora Cc01_g16380 U-box domain-containing protein 9 chr1 - View
Citrus clementina Ciclev10031496m.g scaffold_4 - View
Ceratophyllum demersum CDE02G1707 1 + View
Ceratophyllum demersum CDE09G0479 7 - View
Carpinus fangiana Cfa010370 Cfa04 + View
Cardamine hirsuta CARHR082010 U-box domain-containing protein 9 Chr3 + View
Carya illinoinensis CiPaw.14G041300 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Chr14 + View
Carya illinoinensis CiPaw.13G052200 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Chr13 + View
Citrullus lanatus ClCG07G002170 U-box domain-containing protein CG_Chr07 - View
Cucumis melo MELO3C022726.2 RING-type E3 ubiquitin transferase chr04 - View
Carica papaya Cpa.g.sc8.97 supercontig_8 - View
Chenopodium quinoa AUR62001175 PUB9: U-box domain-containing protein 9 C_Quinoa_Scaffold_2716 + View
Chenopodium quinoa AUR62022150 PUB9: U-box domain-containing protein 9 C_Quinoa_Scaffold_4319 - View
Capsella rubella Carub.0003s0691 scaffold_3 + View
Cucumis sativus L. CsaV3_3G030130 RING-type E3 ubiquitin transferase chr3 - View
Daucus carota DCAR_004755 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_012687 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_018630 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv28827 GWHABJS00000010 - View
Davidia involucrata Dinv22996 GWHABJS00000007 + View
Durio zibethinus Duzib138G0764 NW_019167893.1 + View
Durio zibethinus Duzib133G1124 NW_019167938.1 + View
Durio zibethinus Duzib211G0300 NW_019168049.1 + View
Erigeron canadensis ECA248G2781 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA247G3639 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.K02107 Chr11 - View
Erythranthe guttata Migut.N00648 scaffold_14 + View
Eutrema salsugineum Thhalv10020790m.g PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 scaffold_13 - View
Fragaria x ananassa FAN24G0078 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Fvb2-2 + View
Fragaria x ananassa FAN15G0749 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Fvb2-4 + View
Fragaria x ananassa FAN27G1077 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Fvb2-1 - View
Fragaria vesca FvH4_2g18070 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Fvb2 - View
Gossypium hirsutum Gohir.D07G204100 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 D07 - View
Gossypium hirsutum Gohir.A11G141000 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 A11 + View
Gossypium hirsutum Gohir.D07G166100 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 D07 + View
Gossypium hirsutum Gohir.A07G197800 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 A07 - View
Gossypium hirsutum Gohir.D11G147500 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 D11 + View
Gossypium hirsutum Gohir.A07G160300 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 A07 + View
Glycine max Glyma.08G345800 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Gm08 - View
Gossypium raimondii Gorai.001G229800 Chr01 - View
Gossypium raimondii Gorai.N004700 scaffold_14 - View
Gossypium raimondii Gorai.007G157900 Chr07 + View
Helianthus annuus HanXRQChr04g0107791 Putative armadillo-type fold HanXRQChr04 - View
Helianthus annuus HanXRQChr04g0095181 Putative zinc finger, RING/FYVE/PHD-type; Armadillo-type fold HanXRQChr04 - View
Helianthus annuus HanXRQChr08g0231761 Putative zinc finger, RING/FYVE/PHD-type; Armadillo-type fold HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0781F.1_g216830 Hma1.2p1_0781F.1 + View
Lupinus albus Lalb_Chr19g0125991 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Lalb_Chr19 + View
Lupinus albus Lalb_Chr01g0022041 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Lalb_Chr01 - View
Lotus japonicus Lj1g0010870 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 chr1 - View
Lonicera japonica Lj2A1119T37 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_17860 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_178661 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI07_g08875_MAGBIO AED:0.20 Chr07 - View
Magnolia biondii MBI07_g19428_MAGBIO AED:0.01 Chr07 - View
Malus domestica MD10G1154600 plant U-box 9 Chr10 - View
Malus domestica MD05G1165300 plant U-box 9 Chr05 - View
Manihot esculenta Manes.12G051300 Chromosome12 + View
Manihot esculenta Manes.13G052400 Chromosome13 + View
Medicago truncatula Medtr7g053260 plant U-box protein chr7 - View
Olea europaea Oeu003654.1 chr4 + View
Oryza sativa ssp. japonica Os02g0488600 Armadillo-like helical domain containing protein. chr02 - View
Petunia axillaris Peaxi162Scf00054g00098 U-box domain-containing protein 9 Peaxi162Scf00054 + View
Punica granatum PGR044G0221 NC_045134.1 + View
Prunus persica Prupe.8G193500 Pp08 - View
Pisum sativum Psat3g150640 U-box domain chr3LG5 + View
Populus trichocarpa Potri.002G248600 PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Chr02 + View
Phaseolus vulgaris Phvul.008G134400 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Chr08 + View
Quercus lobata QL09p048947 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0283461 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim13G0051100 chr13 + View
Rhododendron simsii Rhsim01G0249600 chr01 - View
Striga asiatica SGA_v2.0_scaffold77G25280 scaffold77 + View
Striga asiatica SGA_v2.0_scaffold7G04031 scaffold7 - View
Striga asiatica SGA_v2.0_scaffold114G31933 scaffold114 + View
Salvia bowleyana SalBow3G0986 GWHASIU00000006 + View
Salvia bowleyana SalBow6G2626 GWHASIU00000002 + View
Salix brachista Sabra02G0189300 GWHAAZH00000002 + View
Simmondsia chinensis Sc17g0001880 GWHAASQ00000017 - View
Solanum lycopersicum Solyc09g056450.4 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G3BL85_CAPCH) SL4.0ch09 - View
Schrenkiella parvula Sp3g06300 PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 ch3-1 + View
Solanum pennellii Sopen09g010990 ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: response to chitin | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: root | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: plant U-box 17 Spenn-ch09 - View
Selenicereus undatus Hund18473 Scaffold_33675 + View
Selenicereus undatus Hund05595 Scaffold_19641 + View
Trochodendron aralioides TAR365G1210 group16 + View
Theobroma cacao Thecc.01G214500 U-box domain-containing protein 9 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104818987 U-box domain-containing protein 9-like NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104822474 U-box domain-containing protein 9 NW_010966665.1 - View
Trifolium pratense TPR.G26839 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI75G1632 NC_052253.1 - View
Tripterygium wilfordii TWI18G0046 NC_052241.1 + View
Utricularia gibba unitig_749.g13599 unitig_749 + View
Vaccinium macrocarpon vmacro02804 Similar to PUB9: U-box domain-containing protein 9 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14708 Similar to PUB9: U-box domain-containing protein 9 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0018 CM024070.1 + View