Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia38461 Lachesis_group8 + View
Actinidia chinensis Actinidia29915 Lachesis_group25 + View
Avicennia marina MSTRG.10530 ScioBoG_13798_HRSCAF_13862 - View
Cicer arietinum L. Ca_21304_v3 Ca_LG7_v3 + View
Corylus avellana Haze_25954 Similar to VIP3: WD repeat-containing protein VIP3 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc06_g11820 Putative WD repeat-containing protein 61 chr6 + View
Citrus clementina Ciclev10010808m.g scaffold_1 - View
Carpinus fangiana Cfa003042 Cfa01 - View
Carya illinoinensis CiPaw.03G210900 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Chr03 - View
Citrullus lanatus ClCG03G015320 WD repeat-containing protein 61 CG_Chr03 - View
Cucumis melo MELO3C015499.2 WD repeat-containing protein 61 chr02 + View
Carica papaya Cpa.g.sc28.112 supercontig_28 - View
Cucumis sativus L. CsaV3_1G040710 WD repeat-containing protein 61 chr1 + View
Daucus carota DCAR_024719 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv36800 GWHABJS00000001 + View
Durio zibethinus Duzib150G1015 NW_019167882.1 - View
Durio zibethinus Duzib168G1011 NW_019168159.1 - View
Erigeron canadensis ECA240G1097 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.C03405 Chr03 - View
Erythranthe guttata Migut.L01534 scaffold_12 + View
Gossypium hirsutum Gohir.A06G074300 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) A06 + View
Gossypium hirsutum Gohir.D07G013300 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) D07 + View
Gossypium hirsutum Gohir.D06G073100 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) D06 + View
Gossypium hirsutum Gohir.A07G013500 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) A07 + View
Glycine max Glyma.13G107300 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Gm13 + View
Glycine max Glyma.17G052100 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Gm17 - View
Gossypium raimondii Gorai.010G085400 Chr10 + View
Gossypium raimondii Gorai.001G014000 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0672F.1_g200870 Hma1.2p1_0672F.1 - View
Lupinus albus Lalb_Chr07g0181001 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Lalb_Chr07 + View
Lotus japonicus Lj4g0018142 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) chr4 - View
Lonicera japonica Lj4A288G22 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_7_34720 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Lsat_1_v8_lg_7 - View
Malus domestica MD02G1085500 Transducin/WD40 repeat-like superfamily protein Chr02 + View
Malus domestica MD15G1212600 Transducin/WD40 repeat-like superfamily protein Chr15 + View
Manihot esculenta Manes.16G098700 Chromosome16 - View
Medicago truncatula Medtr4g125710 transducin/WD-like repeat-protein chr4 - View
Nelumbo nucifera Nn6g35560 chr6 + View
Nelumbo nucifera Nn8g38754 chr8 - View
Nicotiana tabacum Nitab4.5_0002842g0020 WD40 repeat, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain, WD40 repeat, conserved site, G-protein beta WD-40 repeat Nitab4.5_0002842 + View
Nicotiana tabacum Nitab4.5_0002079g0070 WD40 repeat, WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain, G-protein beta WD-40 repeat, WD40 repeat, conserved site Nitab4.5_0002079 + View
Olea europaea Oeu054828.1 chr9 - View
Olea europaea Oeu051307.1 chr17 + View
Petunia axillaris Peaxi162Scf00498g00525 WD repeat-containing protein 61 Peaxi162Scf00498 + View
Punica granatum PGR142G4460 NC_045128.1 + View
Pisum sativum Psat4g016320 WD domain + G-beta repeat chr4LG4 + View
Populus trichocarpa Potri.006G145800 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Chr06 - View
Phaseolus vulgaris Phvul.003G133800 K12602 - WD repeat-containing protein 61 (WDR61, REC14, SKI8) Chr03 - View
Quercus lobata QL02p061718 CM012294 - View
Rhododendron simsii Rhsim03G0230900 chr03 - View
Striga asiatica SGA_v2.0_scaffold23G10051 scaffold23 + View
Salvia bowleyana SalBow1G7018 GWHASIU00000001 - View
Salix brachista Sabra06G0115300 GWHAAZH00000006 - View
Sechium edule Sed0005858 LG08 + View
Sechium edule Sed0024958 LG12 - View
Solanum lycopersicum Solyc07g041080.3 WD40 repeat (AHRD V3.3 *** A0A200Q1Z4_9MAGN) SL4.0ch07 + View
Solanum lycopersicum Solyc12g009030.2 WD40 repeat (AHRD V3.3 *** A0A200Q1Z4_9MAGN) SL4.0ch12 + View
Solanum pennellii Sopen07g020370 The protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin. | vernalization independence 3 (VIP3) | FUNCTIONS IN: protein binding, nucleotide binding | INVOLVED IN: histone H3-K4 methylation, histone H3-K36 methylation, negative regulation of flower development | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related Spenn-ch07 + View
Solanum pennellii Sopen12g003960 The protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin. | vernalization independence 3 (VIP3) | FUNCTIONS IN: protein binding, nucleotide binding | INVOLVED IN: histone H3-K4 methylation, histone H3-K36 methylation, negative regulation of flower development | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400016078 Vernalization independence 3 ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400000330 Vernalization independence 3 ST4.03ch12 - View
Trochodendron aralioides TAR624G0089 group9 + View
Theobroma cacao Thecc.09G082600 Transducin/WD40 repeat-like superfamily protein Chromosome_9 - View
Trifolium pratense TPR.G9439 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI63G0393 NC_052240.1 + View
Tripterygium wilfordii TWI32G0188 NC_052254.1 + View
Vaccinium macrocarpon vmacro06306 Similar to VIP3: WD repeat-containing protein VIP3 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2073 CM024074.1 + View
Vitis vinifera GSVIVG01015149001 chr11 - View