Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0024586 alpha-amylase [Actinidia chinensis] Chr4 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6250 LG-4 + View
Acer truncatum Atru.chr13.188 chr13 - View
Actinidia chinensis Actinidia15472 Lachesis_group26 - View
Actinidia chinensis Actinidia17027 Lachesis_group28 - View
Arabidopsis lyrata AL2G36170 scaffold_2 + View
Avicennia marina MSTRG.1136 ScioBoG_102833_HRSCAF_103052 - View
Avicennia marina MSTRG.25284 ScioBoG_4119_HRSCAF_4138 + View
Amaranthus hybridus Ah.11g040570 Probable alpha-amylase 2 (AtAMY2) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) AmaHy_arrow1_Scaffold_11 + View
Aquilegia oxysepala Aqoxy6G01875 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2SN1MA K01176 - alpha-amylase (E3.2.1.1, amyA, malS) arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5SXX56 K01176 - alpha-amylase (E3.2.1.1, amyA, malS) arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT1G76130 alpha-amylase-like 2 alpha-amylase%2C putative / 1%2C4-alpha-D-glucan glucanohydrolase%2C putative%2C strong similarity to alpha-amylase GI:7532799 from (Malus x domestica)%3Bcontains Pfam profile PF00128: Alpha amylase%2C catalytic domain. Predicted to be secreted based on SignalP analysis. alpha-amylase-like 2 (AMY2)%3B FUNCTIONS IN: cation binding%2C catalytic activity%2C alpha-amylase activity%2C calcium ion binding%3B INVOLVED IN: carbohydrate metabolic process%2C glycogen catabolic process%3B LOCATED IN: extracellular region%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 (InterPro:IPR006046)%2C Alpha-amylase%2C plant (InterPro:IPR013775)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%2C Glycosyl hydrolase%2C family 13%2C catalytic domain (InterPro:IPR006047)%2C Alpha-amylase%2C C-terminal beta-sheet (InterPro:IPR012850)%3B BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 (TAIR:AT1G69830.1)%3B Has 2455 Blast hits to 2450 proteins in 882 species: Archae - 39%3B Bacteria - 1348%3B Metazoa - 171%3B Fungi - 337%3B Plants - 494%3B Viruses - 0%3B Other Eukaryotes - 66 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0661G021 AmTr_v1.0_scaffold00001 - View
Brassica carinata BcaC08g47107 ChrC08 + View
Brassica carinata BcaC08g47288 ChrC08 - View
Brassica napus A07p41700 A07 + View
Brassica napus C06p50080 C06 + View
Brassica oleracea BolC6t40047H C6 + View
Brassica rapa BraA07t31699Z A07 + View
Beta vulgaris EL10Ac1g02044 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED Chr1_EL10_PGA_scaffold3 - View
Beta vulgaris EL10Ac9g21309 K01176 - alpha-amylase (E3.2.1.1, amyA, malS) Chr9_EL10_PGA_scaffold8 - View
Capsicum annuum CAN.G311.88 PGAv.1.6.scaffold311 + View
Cannabis sativa CANSAT25G3388 NC_044370.1 - View
Corylus avellana Haze_22732 Similar to AMY2: Probable alpha-amylase 2 (Arabidopsis thaliana OX%3D3702) 3 + View
Citrus clementina Ciclev10001348m.g scaffold_5 + View
Cardamine hirsuta CARHR069670 Alpha-amylase like protein Chr2 + View
Carya illinoinensis CiPaw.08G070100 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED Chr08 + View
Carya illinoinensis CiPaw.07G142000 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Chr07 - View
Corchorus olitorius COL.COLO4_26062 Alpha amylase AWUE01019204.1 - View
Carica papaya Cpa.g.sc26.242 supercontig_26 - View
Chenopodium quinoa AUR62036756 AMY1: Alpha-amylase 1 C_Quinoa_Scaffold_3541 + View
Chenopodium quinoa AUR62013843 AMY2: Probable alpha-amylase 2 C_Quinoa_Scaffold_1412 - View
Chenopodium quinoa AUR62012978 AMY2: Probable alpha-amylase 2 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0002s2301 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_4G037030 Alpha-amylase chr4 + View
Daucus carota DCAR_016745 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv31909 GWHABJS00000002 + View
Durio zibethinus Duzib093G2100 NW_019167937.1 + View
Erigeron canadensis ECA233G4007 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.F03529 Chr06 + View
Eutrema salsugineum Thhalv10018631m.g PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED scaffold_9 - View
Fragaria x ananassa FAN27G3389 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Fvb2-1 - View
Fragaria x ananassa FAN15G0491 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Fvb2-4 + View
Fragaria vesca FvH4_2g37840 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A05G255400 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED A05 - View
Gossypium hirsutum Gohir.D05G256900 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED D05 - View
Glycine max Glyma.14G222600 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED Gm14 + View
Gossypium raimondii Gorai.009G268400 Chr09 - View
Lupinus albus Lalb_Chr19g0131631 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Lalb_Chr19 + View
Lonicera japonica Lj4A16G126 GWHAAZE00000004 - View
Lonicera japonica Lj4A802G107 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_29040 3.2.1.1//5.3.1.1 - Alpha-amylase / Glycogenase // Triose-phosphate isomerase / Triosephosphate mutase Lsat_1_v8_lg_8 - View
Malus domestica MD15G1005200 alpha-amylase-like 2 Chr15 - View
Malus domestica MD08G1006000 alpha-amylase-like 2 Chr08 - View
Manihot esculenta Manes.05G141400 Chromosome05 - View
Medicago truncatula Medtr1g026170 alpha amylase domain protein chr1 + View
Nelumbo nucifera Nn5g30882 chr5 + View
Petunia axillaris Peaxi162Scf00174g00137 alpha-amylase-like 2 Peaxi162Scf00174 + View
Prunus persica Prupe.1G357800 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Pp01 - View
Papaver somniferum PSO675G0993 NC_039358.1 + View
Papaver somniferum PSO541G6376 NC_039363.1 + View
Populus trichocarpa Potri.002G014300 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED Chr02 - View
Phaseolus vulgaris Phvul.001G001900 PTHR10357:SF118 - ALPHA-AMYLASE 2-RELATED Chr01 - View
Quercus lobata QL02p013395 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0303841 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0009900 chr06 - View
Striga asiatica SGA_v2.0_scaffold275G46549 scaffold275 + View
Salvia bowleyana SalBow7G1781 GWHASIU00000005 - View
Salix brachista Sabra02G0011400 GWHAAZH00000002 - View
Simmondsia chinensis Sc26g0004540 GWHAASQ00000026 + View
Solanum lycopersicum Solyc04g082090.3 Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC) SL4.0ch04 + View
Schrenkiella parvula Sp5g31260 PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED ch5-7 + View
Solanum pennellii Sopen04g035730 alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica), contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis. | alpha-amylase-like 2 (AMY2) | FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding | INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process | LOCATED IN: extracellular region | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 , Alpha-amylase, plant , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3 Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400009891 Alpha-amylase ST4.03ch04 + View
Selenicereus undatus Hund05141 Scaffold_19641 - View
Trochodendron aralioides TAR625G0028 group4 - View
Theobroma cacao Thecc.08G054200 Alpha-amylase-like 2 Chromosome_8 + View
Tarenaya hassleriana THA.LOC104813768 probable alpha-amylase 2 NW_010965373.1 - View
Trifolium pratense TPR.G26412 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI56G1107 NC_052242.1 + View
Vaccinium macrocarpon vmacro21841 Similar to AMY2: Probable alpha-amylase 2 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01008714001 chr18 - View