Gene: Sopen04g035730

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g035730
  • Transcript Identifier Sopen04g035730.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 76558916-76568375 : positive

Gene Family Information

  • ID HOM05D000983
  • #Genes/#Species 613/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g035730.1

Descriptions

  • Description alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica), contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis. | alpha-amylase-like 2 (AMY2) | FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding | INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process | LOCATED IN: extracellular region | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 , Alpha-amylase, plant , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0004556
IEA
InterProalpha-amylase activity
GO:0005509
IEA
InterProcalcium ion binding
GO:0043169
IEA
InterProcation binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISO
PLAZA Integrative Orthologyextracellular region AT1G76130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013780 Glycosyl hydrolase, all-beta
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
IPR012850 Alpha-amylase, C-terminal beta-sheet
IPR013775 Alpha-amylase, plant
IPR006046 Alpha amylase
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
3.2.3.3.1.1 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase