Gene: Sopen04g035730
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g035730
- Transcript Identifier Sopen04g035730.1
- Gene Type Coding gene
- Location Spenn-ch04 : 76558916-76568375 : positive
Gene Family Information
- ID HOM05D000983
- #Genes/#Species 613/99
- Phylogenetic origin
- ID ORTHO05D001922
- #Genes/#Species 337/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g035730.1
Descriptions
- Description alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica), contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis. | alpha-amylase-like 2 (AMY2) | FUNCTIONS IN: cation binding, catalytic activity, alpha-amylase activity, calcium ion binding | INVOLVED IN: carbohydrate metabolic process, glycogen catabolic process | LOCATED IN: extracellular region | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 13 , Alpha-amylase, plant , Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003824 | IEA | InterPro | catalytic activity | |
GO:0004556 | IEA | InterPro | alpha-amylase activity | |
GO:0005509 | IEA | InterPro | calcium ion binding | |
GO:0043169 | IEA | InterPro | cation binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | ISO | PLAZA Integrative Orthology | extracellular region | AT1G76130 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
3.2.3.3.1.1 | Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.amylase activities.alpha amylase |