Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0029774 PREDICTED: DDB1- and CUL4-associated factor 8-like [Solanum tuberosum] Chr4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G14810 LG-4 + View
Acer truncatum Atru.chr3.3721 chr3 + View
Actinidia chinensis Actinidia24072 Lachesis_group24 - View
Actinidia chinensis Actinidia07104 Lachesis_group13 - View
Arabidopsis lyrata AL5G24240 scaffold_5 + View
Avicennia marina MSTRG.18630 ScioBoG_22153_HRSCAF_22259 - View
Avicennia marina MSTRG.12614 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy4G03190 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1T6MY4 K11804 - WD repeat-containing protein 42A (WDR42A) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JMY4T5 K11804 - WD repeat-containing protein 42A (WDR42A) arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT3G45620 Transducin/WD40 repeat-like superfamily protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays%2C and DDB1b in co-IP assays%2C and may be involved in the formation of a CUL4-based E3 ubiquitin ligase Transducin/WD40 repeat-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1)%3B Has 13791 Blast hits to 9610 proteins in 511 species: Archae - 16%3B Bacteria - 3055%3B Metazoa - 4466%3B Fungi - 3147%3B Plants - 1303%3B Viruses - 0%3B Other Eukaryotes - 1804 (source: NCBI BLink). Transducin/WD40 repeat-like superfamily protein%3B FUNCTIONS IN: protein binding%2C nucleotide binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G35140.1). Chr3 + View
Brassica carinata BcaC01g01964 ChrC01 - View
Brassica napus A06p21330 A06 - View
Brassica rapa BraA06t25221Z A06 - View
Beta vulgaris EL10Ac9g22406 K11804 - WD repeat-containing protein 42A (WDR42A) Chr9_EL10_PGA_scaffold8 - View
Cannabis sativa CANSAT54G1605 NC_044375.1 - View
Cicer arietinum L. Ca_01443_v3 Ca_LG1_v3 + View
Corylus avellana Haze_23946 Similar to LUH: Transcriptional corepressor LEUNIG_HOMOLOG (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g11710 Putative DDB1- and CUL4-associated factor 8 chr1 + View
Citrus clementina Ciclev10028345m.g scaffold_8 + View
Ceratophyllum demersum CDE02G4032 1 + View
Ceratophyllum demersum CDE09G0215 7 - View
Cardamine hirsuta CARHR150000 DDB1-and CUL4-associated factor Chr5 - View
Citrullus lanatus ClCG02G020800 DDB1-and CUL4-associated factor CG_Chr02 - View
Cucumis melo MELO3C025729.2 DDB1- and CUL4-associated factor 8-like chr11 - View
Carica papaya Cpa.g.sc139.59 supercontig_139 - View
Capsella rubella Carub.0005s1147 PTHR15574:SF21 - PROTEIN R11D1.1, ISOFORM B scaffold_5 + View
Cucumis sativus L. CsaV3_6G021810 DDB1-and CUL4-associated factor 8 chr6 + View
Daucus carota DCAR_006033 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv32807 GWHABJS00000010 + View
Erythranthe guttata Migut.D02173 scaffold_4 - View
Eutrema salsugineum Thhalv10002508m.g K11804 - WD repeat-containing protein 42A (WDR42A) scaffold_4 - View
Fragaria x ananassa FAN16G1888 K11804 - WD repeat-containing protein 42A (WDR42A) Fvb3-3 - View
Fragaria x ananassa FAN11G1937 K11804 - WD repeat-containing protein 42A (WDR42A) Fvb3-4 + View
Fragaria x ananassa FAN21G3956 KOG1310 - WD40 repeat protein Fvb3-2 + View
Fragaria vesca FvH4_3g33730 KOG1334 - WD40 repeat protein Fvb3 - View
Glycine max Glyma.15G044600 K11804 - WD repeat-containing protein 42A (WDR42A) Gm15 - View
Glycine max Glyma.13G329300 K11804 - WD repeat-containing protein 42A (WDR42A) Gm13 + View
Helianthus annuus HanXRQChr02g0051401 Probable transducin/WD40 repeat-like superfamily protein HanXRQChr02 + View
Lupinus albus Lalb_Chr24g0394411 K11804 - WD repeat-containing protein 42A (WDR42A) Lalb_Chr24 - View
Lonicera japonica Lj2A1039T64 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_24080 Lsat_1_v8_lg_6 - View
Manihot esculenta Manes.11G140000 Chromosome11 - View
Medicago truncatula Medtr2g093200 transducin/WD-like repeat-protein chr2 - View
Nicotiana tabacum Nitab4.5_0000888g0090 WD40 repeat, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain Nitab4.5_0000888 - View
Nicotiana tabacum Nitab4.5_0000022g0280 WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain, Protein phosphatase 2A, regulatory subunit PR55, WD40 repeat Nitab4.5_0000022 + View
Olea europaea Oeu062272.2 chr13 + View
Petunia axillaris Peaxi162Scf00389g00411 DDB1- and CUL4-associated factor 8 Peaxi162Scf00389 - View
Punica granatum PGR102G2556 NC_045129.1 - View
Pisum sativum Psat5g276880 WD domain + G-beta repeat chr5LG3 - View
Phaseolus vulgaris Phvul.005G137900 K11804 - WD repeat-containing protein 42A (WDR42A) Chr05 + View
Quercus lobata QL01p036421 1 - View
Rhododendron simsii Rhsim01G0221400 chr01 + View
Striga asiatica SGA_v2.0_scaffold2G00914 scaffold2 - View
Salvia bowleyana SalBow3G0887 GWHASIU00000006 + View
Sechium edule Sed0019617 LG01 + View
Solanum lycopersicum Solyc11g072540.3 Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A2U1QKR6_ARTAN) SL4.0ch11 + View
Solanum pennellii Sopen11g030190 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | Transducin/WD40 repeat-like superfamily protein | FUNCTIONS IN: protein binding, nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: CUL4 RING ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein ., WD40/YVTN repeat-like-containing domain Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400012099 WD domain containing protein ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400025376 WD domain containing protein ST4.03ch11 + View
Trochodendron aralioides TAR636G1624 group1 + View
Trochodendron aralioides TAR623G1208 group7 + View
Theobroma cacao Thecc.09G262300 Transducin/WD40 repeat-like superfamily protein Chromosome_9 + View
Trifolium pratense TPR.G11602 Tp57577_TGAC_v2_LG7 - View
Vaccinium macrocarpon vmacro14481 Similar to Dcaf8: DDB1- and CUL4-associated factor 8 (Mus musculus OX%3D10090) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0838 CM024079.1 - View
Vitis vinifera GSVIVG01025114001 chr6 + View