Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004129 hypothetical protein CICLE_v10028655mg [Citrus clementina] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13600 LG-8 - View
Aethionema arabicum Aa31LG2G16080 LG-2 + View
Acer truncatum Atru.chr5.3006 chr5 - View
Arabidopsis lyrata AL7G16770 scaffold_7 + View
Avicennia marina MSTRG.20087 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.16803 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.01g019430 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy5G01652 CHR05 + View
Aquilegia oxysepala Aqoxy6G01089 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NG5KDE K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NCS46Q K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.53VILX K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SA4SRM K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT4G34460 GTP binding protein beta 1 Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes%2C as seen in er plants%2C but differ from er in that the stem is only slightly shorter than that in the wild type%2C the pedicel is slightly longer than that in the wild type%2C and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined%2C with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. It seems to be involved in the calcium-mediated response to extracellular ATP. GTP binding protein beta 1 (AGB1)%3B FUNCTIONS IN: protein binding%2C GTPase activity%2C nucleotide binding%3B INVOLVED IN: in 11 processes%3B LOCATED IN: endoplasmic reticulum%2C plasma membrane%2C CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C Guanine nucleotide-binding protein%2C beta subunit (InterPro:IPR016346)%2C WD40 repeat (InterPro:IPR001680)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C G-protein%2C beta subunit (InterPro:IPR001632)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein (TAIR:AT5G67320.1)%3B Has 60281 Blast hits to 28762 proteins in 834 species: Archae - 58%3B Bacteria - 8505%3B Metazoa - 23635%3B Fungi - 12687%3B Plants - 7683%3B Viruses - 0%3B Other Eukaryotes - 7713 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0733G256 AmTr_v1.0_scaffold00059 + View
Brassica napus A01p03980 A01 + View
Brassica napus C01p04290 C01 + View
Brassica oleracea BolC1t00419H C1 + View
Brassica rapa BraA01t00386Z A01 + View
Beta vulgaris EL10Ac9g21730 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr9_EL10_PGA_scaffold8 + View
Corylus avellana Haze_02378 Similar to GB1: Guanine nucleotide-binding protein subunit beta (Solanum tuberosum OX%3D4113) 1 - View
Coffea canephora Cc02_g17630 Guanine nucleotide-binding protein subunit beta-2 chr2 + View
Citrus clementina Ciclev10028655m.g scaffold_8 - View
Carpinus fangiana Cfa005010 Cfa02 + View
Carya illinoinensis CiPaw.06G135900 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr06 + View
Carya illinoinensis CiPaw.05G063800 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr05 - View
Carica papaya Cpa.g.sc62.142 supercontig_62 - View
Chenopodium quinoa AUR62016731 Guanine nucleotide-binding protein subunit beta-2 C_Quinoa_Scaffold_3670 - View
Chenopodium quinoa AUR62011330 Guanine nucleotide-binding protein subunit beta-2 C_Quinoa_Scaffold_3333 + View
Capsella rubella Carub.0007s0584 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) scaffold_7 + View
Davidia involucrata Dinv23528 GWHABJS00000005 + View
Durio zibethinus Duzib052G0149 NW_019167849.1 - View
Durio zibethinus Duzib132G1223 NW_019167915.1 + View
Durio zibethinus Duzib248G1446 NW_019168048.1 - View
Erigeron canadensis ECA236G2533 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA234G4263 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.I01264 Chr09 - View
Erythranthe guttata Migut.B00242 scaffold_2 + View
Eutrema salsugineum Thhalv10025475m.g K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) scaffold_1 + View
Fragaria x ananassa FAN24G2385 KOG0286 - G-protein beta subunit Fvb2-2 + View
Gossypium hirsutum Gohir.A03G194000 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) A03 - View
Gossypium hirsutum Gohir.D13G033100 KOG0286 - G-protein beta subunit D13 + View
Gossypium hirsutum Gohir.A13G034700 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) A13 + View
Gossypium hirsutum Gohir.D02G215100 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) D02 - View
Glycine max Glyma.11G118500 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Gm11 + View
Glycine max Glyma.12G043900 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Gm12 + View
Gossypium raimondii Gorai.005G243000 Chr05 - View
Gossypium raimondii Gorai.013G037500 Chr13 + View
Helianthus annuus HanXRQChr10g0307211 Probable guanine nucleotide-binding protein subunit beta-2 HanXRQChr10 + View
Hydrangea macrophylla Hma1.2p1_0066F.1_g036470 Hma1.2p1_0066F.1 + View
Lotus japonicus Lj1g0010946 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) chr1 + View
Lonicera japonica Lj9A369G66 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_89161 Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_5_118640 Lsat_1_v8_lg_5 + View
Malus domestica MD05G1067400 GTP binding protein beta 1 Chr05 + View
Malus domestica MD10G1077300 GTP binding protein beta 1 Chr10 + View
Manihot esculenta Manes.17G100500 Chromosome17 - View
Manihot esculenta Manes.15G164000 Chromosome15 + View
Nelumbo nucifera Nn1g05027 chr1 + View
Nelumbo nucifera Nn5g29575 chr5 - View
Nicotiana tabacum Nitab4.5_0000308g0050 Guanine nucleotide-binding protein, beta subunit, WD40 repeat, WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain, G-protein, beta subunit, G-protein beta WD-40 repeat, WD40 repeat, conserved site Nitab4.5_0000308 - View
Nicotiana tabacum Nitab4.5_0004172g0080 WD40 repeat, Guanine nucleotide-binding protein, beta subunit, WD40 repeat, conserved site, G-protein beta WD-40 repeat, WD40-repeat-containing domain, G-protein, beta subunit, WD40/YVTN repeat-like-containing domain Nitab4.5_0004172 + View
Punica granatum PGR142G3944 NC_045128.1 + View
Prunus persica Prupe.8G098100 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Pp08 + View
Papaver somniferum PSO541G0822 NC_039363.1 + View
Populus trichocarpa Potri.009G115300 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr09 - View
Populus trichocarpa Potri.004G153700 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr04 - View
Phaseolus vulgaris Phvul.011G045900 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) Chr11 + View
Quercus lobata QL11p043433 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0264111 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim05G0074800 chr05 + View
Salvia bowleyana SalBow6G5747 GWHASIU00000002 + View
Salvia bowleyana SalBow6G4765 GWHASIU00000002 + View
Salix brachista Sabra04G0102100 GWHAAZH00000004 - View
Salix brachista Sabra09G0088400 GWHAAZH00000009 - View
Solanum lycopersicum Solyc01g109560.3 Guanine nucleotide-binding protein subunit beta (AHRD V3.3 *** A0A2G3BVT8_CAPCH) SL4.0ch01 - View
Schrenkiella parvula Sp7g32260 K04536 - guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (GNB1) ch7-5 - View
Solanum pennellii Sopen01g051750 Guanine nucleotide-binding protein subunit beta - Solanum tuberosum (Potato), Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | GTP binding protein beta 1 (AGB1) | FUNCTIONS IN: protein binding, GTPase activity, nucleotide binding | INVOLVED IN: in 11 processes | LOCATED IN: endoplasmic reticulum, plasma membrane, CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , Guanine nucleotide-binding protein, beta subunit , WD40 repeat , G-protein, beta subunit , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG401000722 Guanine nucleotide-binding protein subunit beta ST4.03ch01 - View
Selenicereus undatus Hund06228 Scaffold_33676 - View
Trochodendron aralioides TAR381G1531 group11 - View
Trochodendron aralioides TAR376G0761 group14 - View
Trochodendron aralioides TAR628G0260 group5 - View
Theobroma cacao Thecc.02G086200 GTP binding protein beta 1 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104807323 guanine nucleotide-binding protein subunit beta-1 NW_010963495.1 + View
Tripterygium wilfordii TWI31G0251 NC_052233.1 + View
Vaccinium macrocarpon vmacro17497 Similar to Guanine nucleotide-binding protein subunit beta-2 (Nicotiana tabacum OX%3D4097) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02113 Similar to Guanine nucleotide-binding protein subunit beta-2 (Nicotiana tabacum OX%3D4097) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1308 CM024076.1 + View
Vitis vinifera GSVIVG01031958001 chr3 - View