Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011479 PREDICTED: protein CASP [Vitis vinifera] Contig790 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.792 chr9 - View
Actinidia chinensis Actinidia35081 Lachesis_group2 - View
Arabidopsis lyrata AL3G31770 scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7R0LHH K09313 - homeobox protein cut-like (CUTL) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.71FAZ0 K09313 - homeobox protein cut-like (CUTL) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT3G18480 CCAAT-displacement protein alternatively spliced product This gene is predicted to encode a protein that functions as a Golgi apparatus structural component%2C known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers%2C and this localization appears to require the C-terminal (565%E2%80%93689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation. CCAAT-displacement protein alternatively spliced product (CASP)%3B INVOLVED IN: intra-Golgi vesicle-mediated transport%3B LOCATED IN: integral to membrane%2C Golgi apparatus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: CASP%2C C-terminal (InterPro:IPR012955)%3B Has 108439 Blast hits to 62245 proteins in 2877 species: Archae - 1242%3B Bacteria - 16953%3B Metazoa - 49041%3B Fungi - 8922%3B Plants - 5181%3B Viruses - 394%3B Other Eukaryotes - 26706 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB04g20769 ChrB04 + View
Brassica napus C01p45740 C01 - View
Brassica rapa BraA01t03672Z A01 - View
Beta vulgaris EL10Ac5g11426 K09313 - homeobox protein cut-like (CUTL) Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G587.83 PGAv.1.6.scaffold587 + View
Cicer arietinum L. Ca_25454_v3 Ca_LG8_v3 + View
Coffea canephora Cc04_g07300 Protein CASP chr4 + View
Citrus clementina Ciclev10019149m.g scaffold_3 - View
Carpinus fangiana Cfa019797 Cfa08 + View
Carya illinoinensis CiPaw.15G128500 K09313 - homeobox protein cut-like (CUTL) Chr15 - View
Chenopodium quinoa AUR62029852 CASP: Protein CASP C_Quinoa_Scaffold_3500 - View
Capsella rubella Carub.0003s1824 K09313 - homeobox protein cut-like (CUTL) scaffold_3 + View
Durio zibethinus Duzib084G1378 NW_019167827.1 - View
Eucalyptus grandis Eucgr.B00707 Chr02 - View
Eutrema salsugineum Thhalv10020192m.g K09313 - homeobox protein cut-like (CUTL) scaffold_13 - View
Fragaria x ananassa FAN18G2415 PF08172 - CASP C terminal (CASP_C) Fvb5-1 + View
Fragaria x ananassa FAN18G2885 K09313 - homeobox protein cut-like (CUTL) Fvb5-1 + View
Fragaria x ananassa FAN08G2631 K09313 - homeobox protein cut-like (CUTL) Fvb5-3 - View
Fragaria x ananassa FAN04G0597 K09313 - homeobox protein cut-like (CUTL) Fvb5-4 + View
Fragaria vesca FvH4_5g12492 K09313 - homeobox protein cut-like (CUTL) Fvb5 + View
Gossypium hirsutum Gohir.D12G266250 D12 - View
Gossypium raimondii Gorai.008G286000 Chr08 - View
Lupinus albus Lalb_Chr24g0397611 K09313 - homeobox protein cut-like (CUTL) Lalb_Chr24 + View
Lotus japonicus Lj2g0006103 K09313 - homeobox protein cut-like (CUTL) chr2 - View
Lotus japonicus Lj4g0025474 K09313 - homeobox protein cut-like (CUTL) chr4 + View
Lonicera japonica Lj5C146T15 GWHAAZE00000005 - View
Manihot esculenta Manes.05G138800 Chromosome05 + View
Medicago truncatula Medtr8g103950 CASP carboxy-terminal protein chr8 - View
Petunia axillaris Peaxi162Scf00013g00943 Protein CASP Peaxi162Scf00013 - View
Punica granatum PGR083G0937 NC_045133.1 - View
Populus trichocarpa Potri.012G061000 K09313 - homeobox protein cut-like (CUTL) Chr12 + View
Quercus lobata QL10p023827 10 - View
Rhododendron simsii Rhsim12G0143900 chr12 + View
Salix brachista Sabra12G0044300 GWHAAZH00000012 + View
Solanum lycopersicum Solyc06g069210.3 protein CASP (AHRD V3.3 *** A0A2I4GTH2_9ROSI) SL4.0ch06 + View
Solanum pennellii Sopen06g026470 This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565ñ689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation. | CCAAT-displacement protein alternatively spliced product (CASP) | INVOLVED IN: intra-Golgi vesicle-mediated transport | LOCATED IN: integral to membrane, Golgi apparatus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: CASP, C-terminal Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400004053 Protein CASP ST4.03ch06 + View
Selenicereus undatus Hund02403 Scaffold_33678 + View
Trifolium pratense TPR.G21711 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI81G0923 NC_052251.1 + View
Tripterygium wilfordii TWI15G0076 NC_052247.1 - View
Vaccinium macrocarpon vmacro16451 Similar to CASP: Protein CASP (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G1696 CM024077.1 + View
Vitis vinifera GSVIVG01008258001 chr17 + View