Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0028210 unnamed protein product [Coffea canephora] Chr1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G6770 LG-6 + View
Aethionema arabicum Aa31LG9G10930 LG-9 + View
Acer truncatum Atru.chr1.332 chr1 - View
Acer truncatum Atru.chr9.2108 chr9 - View
Actinidia chinensis Actinidia33726 Lachesis_group20 + View
Actinidia chinensis Actinidia08592 Lachesis_group6 - View
Actinidia chinensis Actinidia27360 Lachesis_group14 + View
Actinidia chinensis Actinidia03143 Lachesis_group3 + View
Arabidopsis lyrata AL6G45470 scaffold_6 - View
Arabidopsis lyrata AL7G29840 scaffold_7 - View
Amaranthus hybridus Ah.07g206400 Protein SGT1 homolog B (AtSGT1b) (Protein ENHANCED DOWNY MILDEW 1) (Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 3) (Suppressor of G2 allele of SKP1 homolog B) AmaHy_arrow1_Scaffold_7 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MC01IH K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4FT00Z K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A992JM K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K7FQ7Q K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G11260 phosphatase-like protein Functions in plant disease resistance signaling%2C SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. SGT1B%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: in 6 processes%3B LOCATED IN: SCF ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: CS-like domain (InterPro:IPR007052)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C SGS (InterPro:IPR007699)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C HSP20-like chaperone (InterPro:IPR008978)%2C Tetratricopeptide repeat (InterPro:IPR019734)%2C CS domain (InterPro:IPR017447)%3B BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G23570.2)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT4G23570 phosphatase-like protein Closely related to SGT1B%2C may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance. SGT1A%3B FUNCTIONS IN: protein binding%3B INVOLVED IN: defense response%2C ubiquitin-dependent protein catabolic process%2C embryo development ending in seed dormancy%3B LOCATED IN: SCF ubiquitin ligase complex%2C nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C SGS (InterPro:IPR007699)%2C HSP20-like chaperone (InterPro:IPR008978)%2C CS domain (InterPro:IPR017447)%2C CS-like domain (InterPro:IPR007052)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: phosphatase-related (TAIR:AT4G11260.1)%3B Has 12440 Blast hits to 8629 proteins in 714 species: Archae - 442%3B Bacteria - 3949%3B Metazoa - 2875%3B Fungi - 1120%3B Plants - 1288%3B Viruses - 0%3B Other Eukaryotes - 2766 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC04g21121 ChrC04 - View
Brassica carinata BcaB01g02704 ChrB01 + View
Brassica carinata BcaB01g01623 ChrB01 - View
Brassica carinata BcaC09g50973 ChrC09 - View
Brassica carinata BcaB05g23846 ChrB05 + View
Brassica napus C09p35370 C09 + View
Brassica napus C01p18550 C01 + View
Brassica napus A03p54520 A03 + View
Brassica napus A01p14860 A01 + View
Brassica napus A09p27900 A09 + View
Brassica napus C07p52880 C07 + View
Brassica oleracea BolC7t45786H C7 + View
Brassica oleracea BolC2t10211H C2 + View
Brassica oleracea BolC9t56378H C9 + View
Brassica oleracea BolC1t01780H C1 + View
Brassica rapa BraA01t01428Z A01 + View
Brassica rapa BraA03t14516Z A03 + View
Brassica rapa BraA09t38359Z A09 + View
Beta vulgaris EL10Ac3g05391 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT21G0043 NC_044374.1 + View
Cannabis sativa CANSAT21G0998 NC_044374.1 - View
Corylus avellana Haze_08751 Similar to SGT1B: Protein SGT1 homolog B (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc02_g02210 Protein SGT1 homolog chr2 - View
Citrus clementina Ciclev10005190m.g scaffold_9 + View
Carpinus fangiana Cfa016307 Cfa06 + View
Carpinus fangiana Cfa012250 Cfa05 + View
Cardamine hirsuta CARHR230950 SGT1 suppressor of G2 allele of SKP1 Chr7 + View
Cardamine hirsuta CARHR255330 SGT1-like protein Chr8 + View
Carya illinoinensis CiPaw.12G088900 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr12 - View
Carica papaya Cpa.g.sc107.130 supercontig_107 + View
Chenopodium quinoa AUR62021095 SGT1B: Protein SGT1 homolog B C_Quinoa_Scaffold_1783 - View
Capsella rubella Carub.0006s3011 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) scaffold_6 - View
Daucus carota DCAR_010650 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv35270 GWHABJS00000009 - View
Davidia involucrata Dinv28377 GWHABJS00000004 - View
Davidia involucrata Dinv37592 GWHABJS00000017 - View
Durio zibethinus Duzib205G0940 NW_019168381.1 + View
Erigeron canadensis ECA238G4709 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.D01807 Chr04 - View
Eucalyptus grandis Eucgr.A02714 Chr01 - View
Erythranthe guttata Migut.F00275 scaffold_6 - View
Eutrema salsugineum Thhalv10025590m.g K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) scaffold_1 - View
Eutrema salsugineum Thhalv10028764m.g K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) scaffold_3 + View
Fragaria x ananassa FAN06G1813 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7-2 + View
Fragaria vesca FvH4_7g30490 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Fvb7 + View
Gossypium hirsutum Gohir.A12G253000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) A12 - View
Gossypium hirsutum Gohir.D12G255426 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) D12 - View
Glycine max Glyma.11G021000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm11 - View
Glycine max Glyma.10G230000 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm10 - View
Glycine max Glyma.01G222400 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm01 + View
Glycine max Glyma.09G128800 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm09 - View
Glycine max Glyma.16G176200 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Gm16 - View
Hydrangea macrophylla Hma1.2p1_0327F.1_g126510 Hma1.2p1_0327F.1 + View
Lupinus albus Lalb_Chr09g0320811 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Lalb_Chr09 - View
Lotus japonicus Lj2g0006755 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) chr2 + View
Lotus japonicus LjContig00312_ERROPOS870357g0000946 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Contig00312_ERROPOS870357 - View
Lonicera japonica Lj2A178T48 GWHAAZE00000002 - View
Lonicera japonica Lj1C1007T6 GWHAAZE00000001 + View
Magnolia biondii MBI06_g33537_MAGBIO AED:0.18 Chr06 + View
Malus domestica MD07G1280600 phosphatase-related Chr07 + View
Malus domestica MD01G1210400 phosphatase-related Chr01 + View
Manihot esculenta Manes.02G016700 Chromosome02 - View
Manihot esculenta Manes.06G153900 Chromosome06 + View
Nelumbo nucifera Nn1g01692 chr1 + View
Punica granatum PGR031G2632 NC_045127.1 + View
Punica granatum PGR042G1296 NC_045130.1 - View
Prunus persica Prupe.2G302800 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Pp02 + View
Pisum sativum Psat2g183880 SGS domain chr2LG1 + View
Phaseolus vulgaris Phvul.002G160300 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) Chr02 + View
Quercus lobata QL02p033314 CM012294 - View
Quercus lobata QL09p012344 9 - View
Rhododendron simsii Rhsim07G0087100 chr07 - View
Rhododendron simsii Rhsim03G0192500 chr03 + View
Salvia bowleyana SalBow4G2106 GWHASIU00000008 - View
Schrenkiella parvula Sp6g06190 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) ch6-1 + View
Schrenkiella parvula Sp7g21490 K12795 - suppressor of G2 allele of SKP1 (SUGT1, SGT1) ch7-4 + View
Solanum tuberosum PGSC0003DMG400020884 SGT1 ST4.03ch03 + View
Trochodendron aralioides TAR636G2302 group1 - View
Trochodendron aralioides TAR629G0046 group0 + View
Trochodendron aralioides TAR375G0777 group15 + View
Theobroma cacao Thecc.03G186400 Phosphatase-related Chromosome_3 + View
Tarenaya hassleriana THA.LOC104814751 protein SGT1 homolog A-like NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104813028 protein SGT1 homolog A-like isoform X1 NW_010965372.1 + View
Trifolium pratense TPR.G6657 Tp57577_TGAC_v2_LG2 + View
Vaccinium macrocarpon vmacro13977 Similar to SGT1B: Protein SGT1 homolog B (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro06613 Similar to SGT1A: Protein SGT1 homolog A (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1038 CM024074.1 - View
Vitis vinifera GSVIVG01028818001 chr16 + View
Vitis vinifera GSVIVG01019422001 chr2 + View