Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019569 ICE1 [Camellia sinensis] Chr2 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G5800 LG-2 + View
Acer truncatum Atru.chr6.2650 chr6 + View
Actinidia chinensis Actinidia37726 Lachesis_group21 - View
Actinidia chinensis Actinidia19556 Lachesis_group3 - View
Arabidopsis lyrata AL5G15600 scaffold_5 - View
Avicennia marina MSTRG.3042 ScioBoG_102835_HRSCAF_103059 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J8HG2W PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein%2C and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. INDUCER OF CBF EXPRESSION 1 (ICE1)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1)%3B Has 2623 Blast hits to 2616 proteins in 144 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 19%3B Fungi - 30%3B Plants - 2572%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). INDUCER OF CBF EXPRESSION 1 (ICE1)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G12860.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC03g17383 ChrC03 - View
Brassica carinata BcaB07g30215 ChrB07 + View
Brassica napus A06p41770 A06 + View
Brassica napus C02p53290 C02 - View
Brassica napus C07p35760 C07 - View
Brassica napus A02p34730 A02 - View
Brassica oleracea BolC7t44096H C7 - View
Brassica oleracea BolC2t11402H C2 - View
Brassica rapa BraA02t08480Z A02 - View
Beta vulgaris EL10Ac6g13391 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT64G2858 NC_044379.1 - View
Cicer arietinum L. Ca_08132_v3 Ca_LG3_v3 + View
Corylus avellana Haze_14941 Similar to SCRM: Transcription factor ICE1 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_07111 Similar to SCRM: Transcription factor ICE1 (Arabidopsis thaliana OX%3D3702) 4 - View
Citrus clementina Ciclev10015052m.g scaffold_2 - View
Carpinus fangiana Cfa007170 Cfa03 - View
Carya illinoinensis CiPaw.04G001600 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Chr04 - View
Carya illinoinensis CiPaw.03G002900 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Chr03 - View
Citrullus lanatus ClCG05G012690 Inducer of CBF expression 1 CG_Chr05 - View
Cucumis melo MELO3C014812.2 Transcription factor Inducer of CBF expression 1 chr06 - View
Carica papaya Cpa.g.sc70.77 supercontig_70 - View
Capsella rubella Carub.0005s0478 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED scaffold_5 - View
Cucumis sativus L. CsaV3_3G027730 Transcription factor Inducer of CBF expression 1 chr3 + View
Daucus carota DCAR_014476 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv25620 GWHABJS00000012 + View
Davidia involucrata Dinv33285 GWHABJS00000014 - View
Durio zibethinus Duzib264G0629 NW_019167960.1 - View
Durio zibethinus Duzib187G0201 NW_019167860.1 - View
Durio zibethinus Duzib147G0556 NW_019168470.1 + View
Eucalyptus grandis Eucgr.G01938 Chr07 - View
Erythranthe guttata Migut.F00016 scaffold_6 - View
Eutrema salsugineum Thhalv10004059m.g PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED scaffold_6 + View
Gossypium hirsutum Gohir.A07G232300 KOG4447 - Transcription factor TWIST A07 + View
Gossypium hirsutum Gohir.D07G239500 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED D07 + View
Glycine max Glyma.16G049400 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Gm16 - View
Glycine max Glyma.19G102000 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Gm19 + View
Glycine max Glyma.16G147200 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Gm16 + View
Gossypium raimondii Gorai.001G275600 Chr01 + View
Lotus japonicus Lj1g0019385 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED chr1 - View
Magnolia biondii MBI11_g11866_MAGBIO AED:0.27 Chr11 - View
Malus domestica MD17G1007400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr17 - View
Malus domestica MD09G1003800 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr09 - View
Manihot esculenta Manes.04G092400 Chromosome04 + View
Manihot esculenta Manes.06G125900 Chromosome06 + View
Medicago truncatula Medtr7g083900 basic helix loop helix protein BHLH23 chr7 + View
Nelumbo nucifera Nn4g22162 chr4 - View
Olea europaea Oeu003421.1 chr7 + View
Oryza sativa ssp. japonica Os01g0928000 Basic helix-loop-helix (bHLH) transcription factor, Control of stomatal initiation, Regulation of mature stoma differentiation chr01 - View
Oryza sativa ssp. japonica Os11g0523700 bHLH transcription factor, Positive regulation of chilling tolerance, Control of stomatal initiation, Regulation of mature stoma differentiation chr11 + View
Punica granatum PGR142G4035 NC_045128.1 + View
Prunus persica Prupe.3G312800 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Pp03 + View
Pisum sativum Psat3g093840 Helix-loop-helix DNA-binding domain chr3LG5 + View
Papaver somniferum PSO017G5602 NC_039362.1 + View
Papaver somniferum PSO017G2650 NC_039362.1 - View
Papaver somniferum PSO478G3090 NC_039361.1 - View
Phaseolus vulgaris Phvul.004G070125 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED Chr04 - View
Phaseolus vulgaris Phvul.001G085500 Chr01 - View
Quercus lobata QL02p069822 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0176421 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0039700 chr08 - View
Rhododendron simsii Rhsim08G0196100 chr08 + View
Striga asiatica SGA_v2.0_scaffold44G16949 scaffold44 + View
Salix brachista Sabra12G0078300 GWHAAZH00000012 + View
Schrenkiella parvula Sp2g15870 PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED ch2-4 - View
Trochodendron aralioides TAR622G1318 group8 + View
Trochodendron aralioides TAR629G3440 group0 - View
Theobroma cacao Thecc.04G046700 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104805958 transcription factor ICE1-like NW_010961290.1 - View
Tripterygium wilfordii TWI34G0422 NC_052235.1 - View
Tripterygium wilfordii TWI32G0114 NC_052254.1 + View
Vaccinium macrocarpon vmacro18374 Similar to SCRM: Transcription factor ICE1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2696 CM024070.1 - View
Vitis vinifera GSVIVG01032998001 chr14 - View