Gene: Sp2g15870

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp2g15870
  • Transcript Identifier Sp2g15870.1
  • Gene Type Coding gene
  • Location ch2-4 : 3993937-3995849 : negative

Gene Family Information

  • ID HOM05D000884
  • #Genes/#Species 677/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp2g15870.v2.2
  • pacid 45090213

Descriptions

  • Description PTHR31945:SF13 - TRANSCRIPTION FACTOR ICE1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010115
ISO
PLAZA Integrative Orthologyregulation of abscisic acid biosynthetic process AT3G26744
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT3G26744
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G26744
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G26744
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT3G26744
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G26744
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT3G26744
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Os11g0523700
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT3G26744
GO:0010440
ISO
PLAZA Integrative Orthologystomatal lineage progression AT3G26744
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT3G26744

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G26744
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G26744
GO:0046983
IEA
InterProprotein dimerization activity
GO:0001046
ISO
PLAZA Integrative Orthologycore promoter sequence-specific DNA binding AT3G26744
GO:0000987
ISO
PLAZA Integrative Orthologycis-regulatory region sequence-specific DNA binding AT3G26744
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G26744

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G26744

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.4.3.4.1 External stimuli response.temperature.cold response.ICE-CBF cold acclimation transcriptional cascade.transcription factor (ICE1/2)