Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.1145 chr8 - View
Actinidia chinensis Actinidia17281 Lachesis_group25 - View
Arabidopsis lyrata AL3G23670 scaffold_3 + View
Arabidopsis lyrata AL6G16790 scaffold_6 + View
Avicennia marina MSTRG.10849 ScioBoG_13798_HRSCAF_13862 - View
Avicennia marina MSTRG.19913 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.6489 ScioBoG_102839_HRSCAF_103093 - View
Amaranthus hybridus Ah.13g075730 AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.04g152540 AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy1G00132 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2WDS0D PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.47YT22 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT3G12060 trichome birefringence-like protein (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 1 (TBL1)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1)%3B Has 1352 Blast hits to 1335 proteins in 32 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 1%3B Fungi - 0%3B Plants - 1346%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G06700 trichome birefringence-like protein (DUF828) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types%2C most notably in trichomes. FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: plant-type cell wall modification%2C pectin biosynthetic process%2C cellulose biosynthetic process%2C secondary cell wall biogenesis%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G12060.1)%3B Has 18773 Blast hits to 6666 proteins in 584 species: Archae - 22%3B Bacteria - 3086%3B Metazoa - 4181%3B Fungi - 2776%3B Plants - 1414%3B Viruses - 506%3B Other Eukaryotes - 6788 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g32552 ChrC06 - View
Brassica carinata BcaC09g48211 ChrC09 + View
Brassica carinata BcaC06g32386 ChrC06 + View
Brassica napus C05p55750 C05 - View
Brassica napus A10p29690 A10 - View
Brassica napus A05p37280 A05 - View
Brassica napus C09p70060 C09 - View
Brassica oleracea BolC9t59749H C9 - View
Brassica oleracea BolC1t05269H C1 - View
Brassica oleracea BolC5t34242H C5 - View
Brassica rapa BraA10t45010Z A10 - View
Brassica rapa BraA05t22524Z A05 - View
Brassica rapa BraA01t04143Z A01 - View
Beta vulgaris EL10Ac3g06894 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr3_EL10_PGA_scaffold7 + View
Beta vulgaris EL10Ac4g10336 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G960.8 PGAv.1.6.scaffold960 - View
Capsicum annuum CAN.G128.49 PGAv.1.6.scaffold128 - View
Cannabis sativa CANSAT64G1695 NC_044379.1 - View
Cicer arietinum L. Ca_08531_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_12049_v3 Ca_LG4_v3 + View
Corylus avellana Haze_20008 Similar to TBR: Protein trichome birefringence (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g15730 Plant protein of unknown function (DUF828) chr6 + View
Citrus clementina Ciclev10011263m.g scaffold_6 - View
Carpinus fangiana Cfa020152 Cfa08 + View
Cardamine hirsuta CARHR206500 Trichome birefringence Chr6 - View
Cardamine hirsuta CARHR086630 Trichome birefringence Chr3 + View
Carya illinoinensis CiPaw.09G029300 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr09 + View
Carya illinoinensis CiPaw.10G025700 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr10 + View
Citrullus lanatus ClCG10G017630 Trichome birefringence CG_Chr10 - View
Cucumis melo MELO3C009613.2 Protein trichome birefringence chr04 - View
Carica papaya Cpa.g.sc85.57 supercontig_85 - View
Chenopodium quinoa AUR62019210 TBR: Protein trichome birefringence C_Quinoa_Scaffold_3107 + View
Chenopodium quinoa AUR62015348 TBR: Protein trichome birefringence C_Quinoa_Scaffold_2751 + View
Capsella rubella Carub.0006s0558 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED scaffold_6 + View
Capsella rubella Carub.0003s1140 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_3G038690 protein trichome birefringence chr3 + View
Daucus carota DCAR_017035 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_013657 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_019850 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv14318 GWHABJS00000015 + View
Davidia involucrata Dinv24060 GWHABJS00000021 - View
Durio zibethinus Duzib093G1334 NW_019167937.1 - View
Durio zibethinus Duzib128G0967 NW_019168481.1 - View
Durio zibethinus Duzib106G1776 NW_019168492.1 - View
Erigeron canadensis ECA247G3428 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA236G4398 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.A02463 Chr01 - View
Eucalyptus grandis Eucgr.B03636 Chr02 + View
Erythranthe guttata Migut.J01848 scaffold_10 - View
Eutrema salsugineum Thhalv10012993m.g PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10020451m.g PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED scaffold_13 - View
Fragaria x ananassa FAN11G2637 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Fvb3-4 + View
Fragaria x ananassa FAN09G3110 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Fvb6-2 - View
Fragaria x ananassa FAN02G0957 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Fvb6-4 + View
Fragaria x ananassa FAN14G1102 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Fvb6-1 - View
Fragaria x ananassa FAN05G3512 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Fvb6-3 - View
Fragaria vesca FvH4_6g22040 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A01G190700 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED A01 + View
Gossypium hirsutum Gohir.A04G057500 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED A04 - View
Gossypium hirsutum Gohir.D01G179000 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED D01 - View
Gossypium hirsutum Gohir.D04G089700 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED D04 + View
Glycine max Glyma.02G171200 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Gm02 + View
Glycine max Glyma.19G149100 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Gm19 - View
Glycine max Glyma.09G109600 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Gm09 + View
Glycine max Glyma.03G145900 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Gm03 - View
Gossypium raimondii Gorai.002G223800 Chr02 + View
Gossypium raimondii Gorai.012G100000 Chr12 + View
Helianthus annuus HanXRQChr14g0438451 Probable TRICHOME BIREFRINGENCE-LIKE 8 HanXRQChr14 - View
Helianthus annuus HanXRQChr05g0132971 Plant Protein of unknown function (DUF828) HanXRQChr05 - View
Lupinus albus Lalb_Chr18g0047971 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Lalb_Chr18 - View
Lupinus albus Lalb_Chr15g0079041 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Lalb_Chr15 - View
Lotus japonicus Lj1g0013039 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED chr1 + View
Lonicera japonica Lj2C365T3 GWHAAZE00000002 + View
Lonicera japonica Lju124C24G6 GWHAAZE00000021 + View
Lactuca sativa Lsat_1_v5_gn_9_26060 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Lsat_1_v8_lg_9 + View
Magnolia biondii MBI19_g23206_MAGBIO AED:0.08 Chr19 - View
Malus domestica MD14G1054900 Plant protein of unknown function (DUF828) Chr14 + View
Malus domestica MD12G1055700 Plant protein of unknown function (DUF828) Chr12 + View
Manihot esculenta Manes.08G044000 Chromosome08 - View
Manihot esculenta Manes.09G036800 Chromosome09 - View
Medicago truncatula Medtr7g093450 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr7 - View
Nelumbo nucifera Nn7g35990 chr7 + View
Nelumbo nucifera Nn2g15710 chr2 - View
Nicotiana tabacum Nitab4.5_0000105g0190 PC-Esterase Nitab4.5_0000105 - View
Nicotiana tabacum Nitab4.5_0001079g0070 PC-Esterase Nitab4.5_0001079 - View
Nicotiana tabacum Nitab4.5_0001440g0080 PC-Esterase Nitab4.5_0001440 + View
Petunia axillaris Peaxi162Scf00003g04538 TRICHOME BIREFRINGENCE-LIKE 4 Peaxi162Scf00003 - View
Petunia axillaris Peaxi162Scf00480g00059 TRICHOME BIREFRINGENCE-LIKE 4 Peaxi162Scf00480 - View
Punica granatum PGR102G2922 NC_045129.1 - View
Punica granatum PGR004G2511 NC_045131.1 - View
Prunus persica Prupe.6G013100 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Pp06 + View
Prunus persica Prupe.7G079400 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Pp07 - View
Pisum sativum Psat3g067800 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p chr3LG5 - View
Papaver somniferum PSO339G0282 NC_039366.1 + View
Papaver somniferum PSO384G3361 NC_039368.1 + View
Populus trichocarpa Potri.001G010900 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Chr01 + View
Populus trichocarpa Potri.016G059300 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr16 - View
Populus trichocarpa Potri.006G193900 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr06 - View
Phaseolus vulgaris Phvul.007G261000 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr07 - View
Phaseolus vulgaris Phvul.001G143600 PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Chr01 - View
Quercus lobata QL01p010083 1 + View
Quercus lobata QL07p024217 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0479331 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0005100 chr03 + View
Rhododendron simsii Rhsim04G0096000 chr04 + View
Striga asiatica SGA_v2.0_scaffold105G30496 scaffold105 - View
Striga asiatica SGA_v2.0_scaffold69G23057 scaffold69 + View
Salvia bowleyana SalBow1G2198 GWHASIU00000001 + View
Salvia bowleyana SalBow6G0255 GWHASIU00000002 - View
Salix brachista Sabra16G0062100 GWHAAZH00000016 - View
Salix brachista Sabra01G0008500 GWHAAZH00000001 + View
Simmondsia chinensis Sc13g0002350 GWHAASQ00000013 - View
Simmondsia chinensis Sc09g0000310 GWHAASQ00000009 + View
Sechium edule Sed0004395 LG12 - View
Sechium edule Sed0027698 LG02 - View
Solanum lycopersicum Solyc10g080550.2 Protein trichome birefringence (AHRD V3.3 *** A0A1U8E8Z1_CAPAN) SL4.0ch10 - View
Solanum lycopersicum Solyc10g078910.3 Protein trichome birefringence (AHRD V3.3 *** A0A1U8EJ41_CAPAN) SL4.0ch10 - View
Schrenkiella parvula Sp6g36160 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED ch6-6 - View
Schrenkiella parvula Sp3g10290 PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED ch3-1 + View
Solanum pennellii Sopen10g029530 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch10 - View
Solanum pennellii Sopen10g031090 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes. | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: plant-type cell wall modification, pectin biosynthetic process, cellulose biosynthetic process, secondary cell wall biogenesis | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400011446 Trichome birefringence ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400023668 Trichome birefringence ST4.03ch10 + View
Selenicereus undatus Hund24797 Scaffold_3410 - View
Trochodendron aralioides TAR369G0126 group18 - View
Trochodendron aralioides TAR633G2088 group2 + View
Trochodendron aralioides TAR623G1596 group7 + View
Theobroma cacao Thecc.05G174000 Emb:CAB82953.1 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104826773 protein trichome birefringence-like NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104799290 protein trichome birefringence-like NW_010968505.1 + View
Trifolium pratense TPR.G18217 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI74G0898 NC_052234.1 + View
Tripterygium wilfordii TWI53G0430 NC_052244.1 - View
Tripterygium wilfordii TWI77G0891 NC_052236.1 - View
Vaccinium macrocarpon vmacro09124 Similar to TBR: Protein trichome birefringence (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro07895 Similar to TBR: Protein trichome birefringence (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1720 CM024070.1 - View
Vigna mungo VMungo0720G2403 CM024071.1 + View
Vitis vinifera GSVIVG01033480001 chr8 - View