Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0046162 PREDICTED: probable E3 ubiquitin-protein ligase ARI11 [Vitis vinifera] Chr8 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G2220 LG-6 - View
Acer truncatum Atru.chr10.604 chr10 - View
Arabidopsis lyrata AL7G34370 scaffold_7 + View
Avicennia marina MSTRG.16335 ScioBoG_19538_HRSCAF_19626 - View
Arabidopsis thaliana AT4G19670 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C C6HC-type (InterPro:IPR002867)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60250.1)%3B Has 3330 Blast hits to 3305 proteins in 225 species: Archae - 1%3B Bacteria - 6%3B Metazoa - 1257%3B Fungi - 660%3B Plants - 920%3B Viruses - 0%3B Other Eukaryotes - 486 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0763G142 AmTr_v1.0_scaffold00032 + View
Brassica carinata BcaC09g51386 ChrC09 + View
Brassica carinata BcaC06g31575 ChrC06 - View
Brassica carinata BcaNung01758 Contig606 + View
Brassica napus A03p51960 A03 - View
Brassica napus C07p50510 C07 - View
Brassica napus A01p11590 A01 - View
Brassica oleracea BolC7t45553H C7 - View
Brassica rapa BraA01t01107Z A01 - View
Brassica rapa BraA03t14283Z A03 - View
Cannabis sativa CANSAT35G0541 NC_044378.1 + View
Citrus clementina Ciclev10014925m.g scaffold_2 - View
Carpinus fangiana Cfa000730 Cfa01 + View
Cardamine hirsuta CARHR226490 RING zinc finger-containing protein Chr7 - View
Carya illinoinensis CiPaw.09G079300 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Cucumis melo MELO3C021806.2 Zinc finger family protein chr12 - View
Capsella rubella Carub.0007s2148 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_1G046510 RBR-type E3 ubiquitin transferase chr1 - View
Erythranthe guttata Migut.M01965 scaffold_13 - View
Eutrema salsugineum Thhalv10024888m.g PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN25G1512 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN21G1375 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb3-2 - View
Lonicera japonica Lj1A1142T64 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_8_117801 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 + View
Punica granatum PGR042G2262 NC_045130.1 + View
Punica granatum PGR083G0861 NC_045133.1 - View
Phaseolus vulgaris Phvul.006G131900 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr06 + View
Quercus lobata QL11p018227 11 + View
Rhododendron simsii Rhsim13G0129700 chr13 + View
Sechium edule Sed0016472 LG01 - View
Solanum lycopersicum Solyc02g069230.3 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A1U8FJ78_CAPAN) SL4.0ch02 + View
Schrenkiella parvula Sp7g18240 PTHR11685//PTHR11685:SF132 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch7-4 - View
Solanum pennellii Sopen02g018390 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, C6HC-type , Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein Spenn-ch02 + View
Trochodendron aralioides TAR627G1088 group6 - View
Theobroma cacao Thecc.06G138800 RING/U-box superfamily protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104811473 uncharacterized protein LOC104811473 NW_010960187.1 - View