Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000702 PREDICTED: pentatricopeptide repeat-containing protein At3g03580 [Vitis vinifera] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16320 LG-4 - View
Acer truncatum Atru.chr9.2348 chr9 + View
Actinidia chinensis Actinidia19023 Lachesis_group9 + View
Arabidopsis lyrata AL1G26100 scaffold_1 - View
Arabidopsis lyrata AL5G26770 scaffold_5 - View
Arabidopsis lyrata AL5G12600 scaffold_5 + View
Avicennia marina MSTRG.702 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.4424 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.11g048460 Pentatricopeptide repeat-containing protein At1g74600, chloroplastic AmaHy_arrow1_Scaffold_11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.47UL4M PTHR11240:SF19 - F7A19.32 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M3W608 PTHR11240:SF19 - F7A19.32 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G14210 Ribonuclease T2 family protein Ribonuclease T2 family protein%3B FUNCTIONS IN: ribonuclease T2 activity%2C endoribonuclease activity%2C RNA binding%3B INVOLVED IN: response to salt stress%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568)%2C Ribonuclease T2%2C active site (InterPro:IPR018188)%3B BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1)%3B Has 2321 Blast hits to 2320 proteins in 411 species: Archae - 0%3B Bacteria - 245%3B Metazoa - 291%3B Fungi - 229%3B Plants - 1455%3B Viruses - 6%3B Other Eukaryotes - 95 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT3G47530 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 30892 Blast hits to 13336 proteins in 235 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 50%3B Fungi - 60%3B Plants - 30406%3B Viruses - 0%3B Other Eukaryotes - 376 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G26820 ribonuclease 3 Encodes ribonuclease RNS3. ribonuclease 3 (RNS3)%3B FUNCTIONS IN: ribonuclease T2 activity%2C endoribonuclease activity%2C RNA binding%3B INVOLVED IN: aging%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568)%2C Ribonuclease T2%2C active site (InterPro:IPR018188)%3B BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1)%3B Has 2544 Blast hits to 2543 proteins in 498 species: Archae - 0%3B Bacteria - 415%3B Metazoa - 284%3B Fungi - 227%3B Plants - 1506%3B Viruses - 7%3B Other Eukaryotes - 105 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC06g34001 ChrC06 - View
Brassica napus C06p33380 C06 - View
Brassica napus A06p43160 A06 - View
Brassica napus C06p18640 C06 - View
Brassica oleracea BolC2t09232H C2 - View
Brassica rapa BraA06t24203Z A06 - View
Beta vulgaris EL10Ac5g10998 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G837.23 PGAv.1.6.scaffold837 + View
Capsicum annuum CAN.G628.10 PGAv.1.6.scaffold628 + View
Coffea canephora Cc11_g13650 Pentatricopeptide repeat-containing protein At1g59720, mitochondrial chr11 + View
Coffea canephora Cc11_g12930 Extracellular ribonuclease LE chr11 - View
Coffea canephora Cc04_g16580 Pentatricopeptide repeat-containing protein At3g47530 chr4 - View
Citrus clementina Ciclev10033899m.g scaffold_4 - View
Citrus clementina Ciclev10031011m.g scaffold_4 + View
Cardamine hirsuta CARHR014630 Ribonuclease T2 family protein Chr1 - View
Cardamine hirsuta CARHR156170 Pentatricopeptide repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.06G085700 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr06 + View
Carya illinoinensis CiPaw.11G043500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 - View
Citrullus lanatus ClCG05G024240 Pentatricopeptide repeat-containing family protein CG_Chr05 - View
Chenopodium quinoa AUR62005793 RNS1: Ribonuclease 1 C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62008421 PCMP-H76: Pentatricopeptide repeat-containing protein At3g47530 C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0001s1390 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 scaffold_1 - View
Capsella rubella Carub.0005s1362 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 - View
Capsella rubella Carub.0001s2415 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 scaffold_1 + View
Cucumis sativus L. CsaV3_1G002340 Pentatricopeptide repeat-containing protein chr1 + View
Daucus carota DCAR_007156 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_031017 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv33763 GWHABJS00000014 - View
Davidia involucrata Dinv19971 GWHABJS00000006 - View
Durio zibethinus Duzib251G0277 NW_019167971.1 - View
Durio zibethinus Duzib205G0661 NW_019168381.1 + View
Durio zibethinus Duzib248G0392 NW_019168048.1 - View
Durio zibethinus Duzib268G1309 NW_019168270.1 - View
Erigeron canadensis ECA232G4837 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.G02497 Chr07 - View
Eucalyptus grandis Eucgr.B00461 Chr02 - View
Erythranthe guttata Migut.D01808 scaffold_4 + View
Erythranthe guttata Migut.L01287 scaffold_12 - View
Erythranthe guttata Migut.I00175 scaffold_9 - View
Eutrema salsugineum Thhalv10010230m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_16 + View
Eutrema salsugineum Thhalv10018254m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_9 - View
Eutrema salsugineum Thhalv10004863m.g PTHR11240//PTHR11240:SF20 - RIBONUCLEASE T2 // SUBFAMILY NOT NAMED scaffold_6 - View
Eutrema salsugineum Thhalv10008717m.g 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 scaffold_5 - View
Fragaria x ananassa FAN22G0963 K01166 - ribonuclease T2 [EC:3.1.27.1] (E3.1.27.1) Fvb4-1 - View
Fragaria x ananassa FAN17G2920 K01166 - ribonuclease T2 [EC:3.1.27.1] (E3.1.27.1) Fvb4-2 + View
Fragaria x ananassa FAN08G2911 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5-3 + View
Fragaria x ananassa FAN12G1136 PF00445//PF01490//PF01535//PF13041//PF14432 - Ribonuclease T2 family (Ribonuclease_T2) // Transmembrane amino acid transporter protein (Aa_trans) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-3 + View
Fragaria vesca FvH4_5g14900 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5 - View
Fragaria vesca FvH4_4g31290 PTHR11240:SF19 - F7A19.32 PROTEIN-RELATED Fvb4 - View
Gossypium hirsutum Gohir.A03G066700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A03 + View
Gossypium hirsutum Gohir.D03G093200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D03 + View
Gossypium hirsutum Gohir.D12G179600 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D12 - View
Glycine max Glyma.05G026400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm05 - View
Glycine max Glyma.18G117601 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm18 + View
Glycine max Glyma.08G302300 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm08 - View
Glycine max Glyma.17G099500 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm17 + View
Gossypium raimondii Gorai.005G143300 Chr05 + View
Gossypium raimondii Gorai.006G023300 Chr06 + View
Hydrangea macrophylla Hma1.2p1_0795F.1_g218860 Hma1.2p1_0795F.1 + View
Lupinus albus Lalb_Chr07g0178031 PF13041 - PPR repeat family (PPR_2) Lalb_Chr07 + View
Lupinus albus Lalb_Chr13g0303221 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr13 - View
Lupinus albus Lalb_Chr08g0235521 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr08 + View
Lotus japonicus Lj4g0025344 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr4 - View
Lotus japonicus Lj1g0013636 PF13041 - PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj3P1037T26 GWHAAZE00000003 - View
Lonicera japonica Lj9P463T9 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_4_9761 PTHR11240//PTHR11240:SF20 - RIBONUCLEASE T2 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_4_8840 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_4_108841 Lsat_1_v8_lg_4 + View
Malus domestica MD13G1071400 Ribonuclease T2 family protein Chr13 - View
Malus domestica MD16G1072300 ribonuclease 1 Chr16 - View
Malus domestica MD09G1051700 Pentatricopeptide repeat (PPR) superfamily protein Chr09 - View
Manihot esculenta Manes.14G078400 Chromosome14 + View
Medicago truncatula Medtr4g108660 PPR containing plant-like protein chr4 + View
Nicotiana tabacum Nitab4.5_0000026g0040 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000026 + View
Olea europaea Oeu047293.3 chr10 - View
Punica granatum PGR044G0849 NC_045134.1 - View
Punica granatum PGR119G0008 NC_045132.1 - View
Punica granatum PGR102G1769 NC_045129.1 - View
Prunus persica Prupe.1G265300 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Papaver somniferum PSO017G3173 NC_039362.1 + View
Papaver somniferum PSO832G1987 NC_039367.1 + View
Phaseolus vulgaris Phvul.002G084500 PTHR11240:SF19 - F7A19.32 PROTEIN-RELATED Chr02 - View
Phaseolus vulgaris Phvul.003G194000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr03 + View
Quercus lobata QL10p016725 10 - View
Quercus lobata QL03p064597 3 - View
Rosa chinensis RcHm_v2.0_Chr7g0181141 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0439731 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0154400 chr12 - View
Rhododendron simsii Rhsim12G0128600 chr12 - View
Striga asiatica SGA_v2.0_scaffold114G31904 scaffold114 + View
Salix brachista Sabra15G0087600 GWHAAZH00000015 + View
Simmondsia chinensis Sc10g0003420 GWHAASQ00000010 + View
Simmondsia chinensis Sc10g0009820 GWHAASQ00000010 + View
Sechium edule Sed0019109 LG06 - View
Sechium edule Sed0016252 LG12 + View
Sechium edule Sed0003784 LG04 + View
Schrenkiella parvula Sp1g12560 3.1.27.1 - Ribonuclease T(2) / Ribonuclease T2 ch1-1 - View
Schrenkiella parvula Sp5g14350 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-1 + View
Trochodendron aralioides TAR371G0300 group13 + View
Tarenaya hassleriana THA.LOC104805163 ribonuclease 1 NW_010961290.1 + View
Trifolium pratense TPR.G11897 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI15G0918 NC_052247.1 + View
Tripterygium wilfordii TWI18G0928 NC_052241.1 + View
Tripterygium wilfordii TWI60G1198 NC_052246.1 + View
Vaccinium macrocarpon vmacro16551 Similar to PCMP-E69: Pentatricopeptide repeat-containing protein At1g74600, chloroplastic (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro17539 Similar to PCMP-H76: Pentatricopeptide repeat-containing protein At3g47530 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2427 CM024074.1 + View
Vigna mungo VMungo0251G1532 CM024069.1 + View