Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG3G8090 | LG-3 | + | View | |
Acer truncatum | Atru.chr1.628 | chr1 | - | View | |
Arabidopsis lyrata | AL8G25910 | scaffold_8 | + | View | |
Aquilegia oxysepala | Aqoxy7G00599 | CHR07 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.R8RU34 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | arahy.Tifrunner.gnm1.Arahy.15 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ZK7SIQ | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | arahy.Tifrunner.gnm1.Arahy.05 | - | View |
Arabidopsis thaliana | AT5G51660 | cleavage and polyadenylation specificity factor 160 cleavage and polyadenylation specificity factor 160 (CPSF160)%3B FUNCTIONS IN: nucleic acid binding%3B INVOLVED IN: mRNA cleavage%2C mRNA polyadenylation%3B LOCATED IN: nucleus%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor%2C A subunit%2C C-terminal (InterPro:IPR004871)%3B BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A (TAIR:AT4G05420.2)%3B Has 1568 Blast hits to 1022 proteins in 220 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 654%3B Fungi - 429%3B Plants - 267%3B Viruses - 0%3B Other Eukaryotes - 218 (source: NCBI BLink). | Chr5 | + | View |
Corylus avellana | Haze_13825 | Similar to CPSF160: Cleavage and polyadenylation specificity factor subunit 1 (Arabidopsis thaliana OX%3D3702) | 5 | + | View |
Coffea canephora | Cc02_g03860 | Cleavage and polyadenylation specificity factor subunit 1 | chr2 | - | View |
Citrus clementina | Ciclev10004147m.g | scaffold_9 | + | View | |
Ceratophyllum demersum | CDE12G0834 | 10 | - | View | |
Carpinus fangiana | Cfa008231 | Cfa03 | - | View | |
Carya illinoinensis | CiPaw.04G063300 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Chr04 | - | View |
Corchorus olitorius | COL.COLO4_14184 | cleavage and polyadenylation specificity factor subunit 1-like protein | AWUE01015387.1 | + | View |
Carica papaya | Cpa.g.sc3.264 | supercontig_3 | - | View | |
Chenopodium quinoa | AUR62016090 | CPSF160: Cleavage and polyadenylation specificity factor subunit 1 | C_Quinoa_Scaffold_3256 | + | View |
Capsella rubella | Carub.0008s1166 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | scaffold_8 | + | View |
Davidia involucrata | Dinv28530 | GWHABJS00000004 | - | View | |
Durio zibethinus | Duzib205G1350 | NW_019168381.1 | + | View | |
Erigeron canadensis | ECA233G5768 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.K00143 | Chr11 | + | View | |
Eutrema salsugineum | Thhalv10012441m.g | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | scaffold_2 | - | View |
Fragaria x ananassa | FAN06G4744 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7-2 | + | View |
Fragaria x ananassa | FAN01G1597 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7-4 | - | View |
Fragaria x ananassa | FAN03G1790 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7-3 | - | View |
Fragaria x ananassa | FAN10G1553 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7-1 | + | View |
Fragaria x ananassa | FAN06G1852 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7-2 | - | View |
Fragaria vesca | FvH4_7g28210 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Fvb7 | + | View |
Gossypium hirsutum | Gohir.D09G045100 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | D09 | - | View |
Gossypium hirsutum | Gohir.A09G043600 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | A09 | - | View |
Glycine max | Glyma.16G203900 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Gm16 | - | View |
Glycine max | Glyma.09G153100 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Gm09 | - | View |
Gossypium raimondii | Gorai.006G065300 | Chr06 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0099F.1_g048870 | Hma1.2p1_0099F.1 | - | View | |
Lupinus albus | Lalb_Chr03g0033081 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Lalb_Chr03 | - | View |
Lotus japonicus | Lj2g0001335 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | chr2 | - | View |
Lonicera japonica | Lj8C36G18 | GWHAAZE00000008 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_8_8061 | Lsat_1_v8_lg_8 | - | View | |
Magnolia biondii | MBI04_g32240_MAGBIO | AED:0.19 | Chr04 | + | View |
Malus domestica | MD01G1186100 | cleavage and polyadenylation specificity factor 160 | Chr01 | + | View |
Malus domestica | MD07G1258300 | cleavage and polyadenylation specificity factor 160 | Chr07 | + | View |
Manihot esculenta | Manes.06G138300 | Chromosome06 | + | View | |
Olea europaea | Oeu021730.2 | chr12 | + | View | |
Petunia axillaris | Peaxi162Scf00192g01018 | cleavage and polyadenylation specificity factor 160 | Peaxi162Scf00192 | - | View |
Prunus persica | Prupe.2G282700 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | Pp02 | + | View |
Papaver somniferum | PSO478G4614 | NC_039361.1 | - | View | |
Papaver somniferum | PSO782G0596 | NC_039365.1 | - | View | |
Phaseolus vulgaris | Phvul.004G126600 | Chr04 | - | View | |
Quercus lobata | QL12p039581 | 12 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr1g0375181 | RcHm_v2.0_Chr1 | + | View | |
Rhododendron simsii | Rhsim03G0172000 | chr03 | + | View | |
Solanum lycopersicum | Solyc03g007100.3 | Cleavage and polyadenylation specificity factor subunit 1 (AHRD V3.3 *** A0A1J3DYG9_NOCCA) | SL4.0ch03 | - | View |
Schrenkiella parvula | Sp6g13860 | K14401 - cleavage and polyadenylation specificity factor subunit 1 (CPSF1, CFT1) | ch6-6 | + | View |
Solanum pennellii | Sopen03g003090 | cleavage and polyadenylation specificity factor 160 (CPSF160) | FUNCTIONS IN: nucleic acid binding | INVOLVED IN: mRNA cleavage, mRNA polyadenylation | LOCATED IN: nucleus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, A subunit, C-terminal | BEST Arabidopsis thaliana protein match is: damaged DNA binding protein 1A | Spenn-ch03 | - | View |
Trochodendron aralioides | TAR374G0906 | group12 | + | View | |
Trochodendron aralioides | TAR375G0129 | group15 | - | View | |
Theobroma cacao | Thecc.03G162000 | Cleavage and polyadenylation specificity factor subunit 1 | Chromosome_3 | + | View |
Tarenaya hassleriana | THA.LOC104825074 | cleavage and polyadenylation specificity factor subunit 1 | NW_010966986.1 | + | View |
Tripterygium wilfordii | TWI39G0431 | NC_052250.1 | + | View | |
Vaccinium macrocarpon | vmacro06764 | Similar to CPSF160: Cleavage and polyadenylation specificity factor subunit 1 (Arabidopsis thaliana OX%3D3702) | chr2_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0464G1100 | CM024077.1 | - | View | |
Vitis vinifera | GSVIVG01018506001 | chr16 | + | View |