Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G13450 LG-6 - View
Acer truncatum Atru.chr3.553 chr3 + View
Actinidia chinensis Actinidia19175 Lachesis_group8 - View
Arabidopsis lyrata AL7G14360 scaffold_7 + View
Aquilegia oxysepala Aqoxy6G01071 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WUH8B9 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IS0T5T PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G36650 plant-specific TFIIB-related protein Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however%2C under conditions of proteosome inhibition it is found in the nucleus. plant-specific TFIIB-related protein (PBRP)%3B FUNCTIONS IN: RNA polymerase II transcription factor activity%2C rDNA binding%3B INVOLVED IN: translational initiation%2C regulation of transcription%2C DNA-dependent%2C transcription initiation%3B LOCATED IN: plastid outer membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812)%2C Transcription factor TFIIB%2C cyclin-related (InterPro:IPR013150)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: transcription factor IIB (TAIR:AT2G41630.1)%3B Has 1560 Blast hits to 1559 proteins in 341 species: Archae - 524%3B Bacteria - 1%3B Metazoa - 239%3B Fungi - 259%3B Plants - 166%3B Viruses - 3%3B Other Eukaryotes - 368 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung04429 Contig1561 - View
Brassica napus C01p02440 C01 + View
Brassica napus A01p02230 A01 + View
Brassica rapa BraA03t15504Z A03 - View
Capsicum annuum CAN.G358.110 PGAv.1.6.scaffold358 - View
Cannabis sativa CANSAT01G0093 NC_044373.1 + View
Corylus avellana Haze_15109 Similar to PBRP1: Plant-specific TFIIB-related protein 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc07_g09330 plant-specific TFIIB-related protein chr7 + View
Citrus clementina Ciclev10025402m.g scaffold_7 - View
Ceratophyllum demersum CDE02G0088 1 + View
Carpinus fangiana Cfa004291 Cfa01 + View
Cardamine hirsuta CARHR244990 Transcription initiation factor IIB Chr7 - View
Carya illinoinensis CiPaw.02G016000 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Chr02 + View
Citrullus lanatus ClCG01G019450 Transcription initiation factor IIB CG_Chr01 + View
Cucumis melo MELO3C007819.2 Transcription initiation factor IIB chr08 + View
Corchorus olitorius COL.COLO4_22101 Transcription factor TFIIB AWUE01017851.1 - View
Chenopodium quinoa AUR62003169 gtf2b: Transcription initiation factor IIB C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0007s0367 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_6G046160 Transcription initiation factor IIB chr6 + View
Daucus carota DCAR_017258 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv39968 GWHABJS00000014 - View
Davidia involucrata Dinv26821 GWHABJS00000021 - View
Durio zibethinus Duzib187G0625 NW_019167860.1 + View
Eucalyptus grandis Eucgr.H01265 Chr08 - View
Erythranthe guttata Migut.H01003 scaffold_8 - View
Eutrema salsugineum Thhalv10024972m.g PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN23G0683 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Fvb1-3 - View
Fragaria x ananassa FAN19G3094 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Fvb1-4 - View
Gossypium hirsutum Gohir.D11G191800 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED D11 - View
Gossypium hirsutum Gohir.A11G185300 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED A11 - View
Glycine max Glyma.01G174900 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Gm01 + View
Gossypium raimondii Gorai.007G204500 Chr07 - View
Lupinus albus Lalb_Chr09g0322521 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Lalb_Chr09 - View
Lonicera japonica Lj4A199T79 GWHAAZE00000004 + View
Malus domestica MD15G1265100 plant-specific TFIIB-related protein Chr15 - View
Manihot esculenta Manes.02G092200 Chromosome02 + View
Medicago truncatula Medtr5g019910 transcription factor IIB chr5 + View
Petunia axillaris Peaxi162Scf00515g00425 Transcription initiation factor IIB Peaxi162Scf00515 + View
Punica granatum PGR102G0302 NC_045129.1 - View
Prunus persica Prupe.7G152500 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Pp07 + View
Papaver somniferum PSO541G3113 NC_039363.1 + View
Populus trichocarpa Potri.007G027600 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED Chr07 - View
Quercus lobata QL06p045633 6 + View
Striga asiatica SGA_v2.0_scaffold276G46640 scaffold276 + View
Salix brachista Sabra07G0024100 GWHAAZH00000007 - View
Salix brachista Sabra05G0102500 GWHAAZH00000005 - View
Sechium edule Sed0022670 LG14 + View
Schrenkiella parvula Sp7g34310 PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED // SUBFAMILY NOT NAMED ch7-6 - View
Selenicereus undatus Hund14146 Scaffold_33679 + View
Theobroma cacao Thecc.01G038000 Plant-specific TFIIB-related protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807446 plant-specific TFIIB-related protein 1 NW_010963495.1 + View
Trifolium pratense TPR.G28685 Tp57577_TGAC_v2_scaf_811 + View
Tripterygium wilfordii TWI73G0565 NC_052232.1 - View
Vaccinium macrocarpon vmacro17849 Similar to PBRP1: Plant-specific TFIIB-related protein 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01018985001 chr4 + View