Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G8910 LG-8 + View
Acer truncatum Atru.chr4.2501 chr4 - View
Acer truncatum Atru.chr5.1448 chr5 + View
Actinidia chinensis Actinidia36974 Lachesis_group10 - View
Actinidia chinensis Actinidia23483 Lachesis_group3 - View
Actinidia chinensis Actinidia40179 Lachesis_group22 + View
Actinidia chinensis Actinidia08503 Lachesis_group18 - View
Avicennia marina MSTRG.4019 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.18236 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.24745 ScioBoG_4088_HRSCAF_4107 + View
Aquilegia oxysepala Aqoxy2G03363 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C339P9 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GGU5D9 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q6BK6L PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5R3DYZ PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN arahy.Tifrunner.gnm1.Arahy.16 - View
Amborella trichopoda ATR0332G080 AmTr_v1.0_scaffold00103 - View
Brassica napus C05p41010 C05 - View
Capsicum annuum CAN.G907.19 PGAv.1.6.scaffold907 - View
Cicer arietinum L. Ca_10916_v3 Ca_LG4_v3 - View
Corylus avellana Haze_00920 Similar to TIC: Protein TIME FOR COFFEE (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc03_g03560 Putative Protein TIME FOR COFFEE chr3 + View
Citrus clementina Ciclev10004136m.g scaffold_9 + View
Carya illinoinensis CiPaw.02G096000 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Chr02 + View
Carya illinoinensis CiPaw.01G164400 PTHR34798//PTHR34798:SF2 - FAMILY NOT NAMED // PROTEIN TIME FOR COFFEE Chr01 + View
Citrullus lanatus ClCG06G006080 Protein TIME FOR COFFEE CG_Chr06 + View
Cucumis melo MELO3C014484.2 TIME FOR coffee-like protein, putative chr05 + View
Corchorus olitorius COL.COLO4_09085 hypothetical protein AWUE01014114.1 - View
Carica papaya Cpa.g.sc58.130 supercontig_58 - View
Chenopodium quinoa AUR62038630 TIC: Protein TIME FOR COFFEE C_Quinoa_Scaffold_1083 + View
Cucumis sativus L. CsaV3_6G038190 protein TIME FOR COFFEE isoform X1 chr6 - View
Daucus carota DCAR_027192 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv38434 GWHABJS00000016 - View
Davidia involucrata Dinv44512 GWHABJS00000014 - View
Durio zibethinus Duzib211G0657 NW_019168049.1 + View
Durio zibethinus Duzib151G0448 NW_019167904.1 + View
Durio zibethinus Duzib212G0865 NW_019168026.1 - View
Durio zibethinus Duzib052G1002 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019167849.1 + View
Durio zibethinus Duzib133G0624 NW_019167938.1 + View
Durio zibethinus Duzib138G1894 NW_019167893.1 + View
Eucalyptus grandis Eucgr.H03537 Chr08 - View
Erythranthe guttata Migut.N00175 scaffold_14 - View
Erythranthe guttata Migut.D00304 scaffold_4 + View
Erythranthe guttata Migut.G00324 scaffold_7 + View
Fragaria x ananassa FAN24G1830 PTHR34798:SF1 - TIC-LIKE PROTEIN Fvb2-2 + View
Fragaria x ananassa FAN22G1385 PTHR34798//PTHR34798:SF2 - FAMILY NOT NAMED // PROTEIN TIME FOR COFFEE Fvb4-1 - View
Fragaria x ananassa FAN15G0058 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN Fvb2-4 - View
Fragaria x ananassa FAN07G2387 PTHR34798//PTHR34798:SF2 - FAMILY NOT NAMED // PROTEIN TIME FOR COFFEE Fvb4-4 + View
Fragaria x ananassa FAN12G3852 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Fvb4-3 - View
Fragaria x ananassa FAN17G1063 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Fvb4-2 + View
Fragaria vesca FvH4_4g15230 PTHR34798//PTHR34798:SF2 - FAMILY NOT NAMED // PROTEIN TIME FOR COFFEE Fvb4 + View
Fragaria vesca FvH4_2g23490 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN Fvb2 - View
Gossypium hirsutum Gohir.A09G214700 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE A09 + View
Gossypium hirsutum Gohir.A12G004700 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN A12 - View
Gossypium hirsutum Gohir.D09G217200 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE D09 + View
Gossypium hirsutum Gohir.D12G004400 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN D12 - View
Glycine max Glyma.20G144400 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Gm20 + View
Glycine max Glyma.10G249300 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Gm10 - View
Glycine max Glyma.02G146900 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN Gm02 - View
Glycine max Glyma.10G027000 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN Gm10 + View
Gossypium raimondii Gorai.006G237700 Chr06 + View
Gossypium raimondii Gorai.008G004200 Chr08 - View
Lupinus albus Lalb_Chr05g0210931 PTHR34798//PTHR34798:SF2 - FAMILY NOT NAMED // PROTEIN TIME FOR COFFEE Lalb_Chr05 + View
Lupinus albus Lalb_Chr09g0319791 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Lalb_Chr09 + View
Lotus japonicus Lj1g0011785 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN chr1 - View
Lotus japonicus Lj5g0016334 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE chr5 + View
Malus domestica MD13G1190800 time for coffee Chr13 + View
Malus domestica MD16G1191200 time for coffee Chr16 - View
Malus domestica MD11G1284500 TIC-like Chr11 - View
Malus domestica MD03G1263800 time for coffee Chr03 - View
Manihot esculenta Manes.15G026500 Chromosome15 + View
Medicago truncatula Medtr1g104710 TIME FOR coffee-like protein, putative chr1 - View
Nelumbo nucifera Nn4g26275 chr4 + View
Petunia axillaris Peaxi162Scf00437g00026 Time for coffee, putative isoform 5 Peaxi162Scf00437 - View
Punica granatum PGR004G2462 NC_045131.1 + View
Prunus persica Prupe.8G240200 PTHR34798:SF1 - TIC-LIKE PROTEIN Pp08 - View
Prunus persica Prupe.1G011200 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Pp01 + View
Pisum sativum Psat6g208200 Unknown gene chr6LG2 - View
Papaver somniferum PSO210G7189 NC_039359.1 - View
Papaver somniferum PSO832G2586 NC_039367.1 - View
Populus trichocarpa Potri.002G052300 PTHR34798//PTHR34798:SF1 - FAMILY NOT NAMED // TIC-LIKE PROTEIN Chr02 - View
Populus trichocarpa Potri.010G089700 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Chr10 - View
Populus trichocarpa Potri.008G151200 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Chr08 + View
Phaseolus vulgaris Phvul.001G151600 PTHR34798:SF1 - TIC-LIKE PROTEIN Chr01 + View
Phaseolus vulgaris Phvul.007G055400 PTHR34798:SF2 - PROTEIN TIME FOR COFFEE Chr07 + View
Quercus lobata QL06p003139 6 - View
Quercus lobata QL12p021604 12 - View
Rosa chinensis RcHm_v2.0_Chr4g0416621 RcHm_v2.0_Chr4 - View
Rosa chinensis RcHm_v2.0_Chr6g0290961 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0022900 chr02 + View
Striga asiatica SGA_v2.0_scaffold10G05098 scaffold10 + View
Striga asiatica SGA_v2.0_scaffold39G15271 scaffold39 - View
Salvia bowleyana SalBow4G2733 GWHASIU00000008 + View
Salvia bowleyana SalBow2G0563 GWHASIU00000007 - View
Salix brachista Sabra10G0053600 GWHAAZH00000010 + View
Salix brachista Sabra02G0042400 GWHAAZH00000002 - View
Salix brachista Sabra08G0115000 GWHAAZH00000008 + View
Simmondsia chinensis Sc13g0004300 GWHAASQ00000013 - View
Sechium edule Sed0021914 LG04 + View
Sapria himalayana SHI00424 scaffold1_25991295 - View
Solanum lycopersicum Solyc09g075830.3 Protein TIME FOR COFFEE (AHRD V3.3 *-* A0A2K3NUY4_TRIPR) SL4.0ch09 + View
Solanum pennellii Sopen09g030650 Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. | TIME FOR COFFEE (TIC) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | BEST Arabidopsis thaliana protein match is: TIC-like Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400031808 ATP binding protein ST4.03ch09 + View
Selenicereus undatus Hund12142 Scaffold_33679 - View
Trochodendron aralioides TAR362G1005 group17 + View
Trochodendron aralioides TAR633G1175 group2 - View
Trochodendron aralioides TAR365G0729 group16 + View
Theobroma cacao Thecc.04G228600 Time for coffee Chromosome_4 + View
Theobroma cacao Thecc.01G277700 Time for coffee Chromosome_1 - View
Trifolium pratense TPR.G5532 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI73G0052 NC_052232.1 - View
Tripterygium wilfordii TWI53G2093 NC_052244.1 + View
Tripterygium wilfordii TWI09G0219 NC_052245.1 + View
Utricularia gibba unitig_748.g8339 unitig_748 - View
Vaccinium macrocarpon vmacro15329 Similar to TIC: Protein TIME FOR COFFEE (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3670 CM024070.1 + View
Vigna mungo VMungo0720G1158 CM024071.1 - View
Vitis vinifera GSVIVG01017938001 chr5 + View
Vitis vinifera GSVIVG01001149001 chr7 - View