Gene: Sopen09g030650
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen09g030650
- Transcript Identifier Sopen09g030650.2
- Gene Type Coding gene
- Location Spenn-ch09 : 78985084-78991323 : positive
Gene Family Information
- ID HOM05D002407
- #Genes/#Species 281/90
- Phylogenetic origin
- ID ORTHO05D002476
- #Genes/#Species 285/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen09g030650.2
Descriptions
- Description Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. | TIME FOR COFFEE (TIC) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: regulation of circadian rhythm | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | BEST Arabidopsis thaliana protein match is: TIC-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042752 | IEA | InterPro | regulation of circadian rhythm | |
GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G22380 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G22380 |
GO:0032502 | ISO | PLAZA Integrative Orthology | developmental process | AT3G22380 |
GO:0005982 | ISO | PLAZA Integrative Orthology | starch metabolic process | AT3G22380 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G22380 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G22380 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR039317 | Protein time for coffee |
Mapman id | Description |
---|---|
27.1.7 | Multi-process regulation.circadian clock system.circadian clock regulator (TIC) |