Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G1080 LG-1 - View
Aethionema arabicum Aa31LG4G11460 LG-4 - View
Acer truncatum Atru.chr11.1704 chr11 + View
Actinidia chinensis Actinidia12309 Lachesis_group4 + View
Actinidia chinensis Actinidia33235 Lachesis_group12 + View
Arabidopsis lyrata AL1G25790 scaffold_1 + View
Arabidopsis lyrata AL2G28520 scaffold_2 + View
Avicennia marina MSTRG.7771 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.2326 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.13437 ScioBoG_18778_HRSCAF_18863 - View
Aquilegia oxysepala Aqoxy3G03522 CHR03 - View
Arabidopsis thaliana AT1G69410 eukaryotic elongation factor 5A-3 Encodes eIF5A-2%2C a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950%2C eIF5A-2/At1g26630 and eIF5A-3/At1g69410. eukaryotic elongation factor 5A-3 (ELF5A-3)%3B FUNCTIONS IN: ribosome binding%2C RNA binding%2C translation elongation factor activity%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C translational frameshifting%2C positive regulation of translational termination%2C peptidyl-lysine modification to hypusine%2C positive regulation of translational elongation%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-1 (TAIR:AT1G13950.1)%3B Has 1331 Blast hits to 1330 proteins in 408 species: Archae - 255%3B Bacteria - 0%3B Metazoa - 363%3B Fungi - 252%3B Plants - 260%3B Viruses - 0%3B Other Eukaryotes - 201 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection. FUMONISIN B1-RESISTANT12 (FBR12)%3B FUNCTIONS IN: translation initiation factor activity%3B INVOLVED IN: in 7 processes%3B LOCATED IN: nucleus%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1)%3B Has 1331 Blast hits to 1330 proteins in 409 species: Archae - 256%3B Bacteria - 0%3B Metazoa - 365%3B Fungi - 242%3B Plants - 261%3B Viruses - 0%3B Other Eukaryotes - 207 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G13950 eukaryotic elongation factor 5A-1 Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines%2C xylem formation is reduced. eukaryotic elongation factor 5A-1 (ELF5A-1)%3B FUNCTIONS IN: ribosome binding%2C RNA binding%2C translation elongation factor activity%2C translation initiation factor activity%3B INVOLVED IN: translational initiation%2C xylem development%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Translation elongation factor%2C IF5A%2C hypusine site (InterPro:IPR019769)%2C Translation protein SH3-like%2C subgroup (InterPro:IPR014722)%2C Translation elongation factor%2C IF5A (InterPro:IPR001884)%2C Translation elongation factor%2C IF5A C-terminal (InterPro:IPR020189)%2C Translation protein SH3-like (InterPro:IPR008991)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C KOW (InterPro:IPR005824)%3B BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 (TAIR:AT1G69410.1)%3B Has 1356 Blast hits to 1355 proteins in 415 species: Archae - 264%3B Bacteria - 0%3B Metazoa - 366%3B Fungi - 246%3B Plants - 261%3B Viruses - 0%3B Other Eukaryotes - 219 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB08g34349 ChrB08 + View
Brassica napus C05p24380 C05 - View
Brassica napus A07p35700 A07 + View
Brassica napus C06p40520 C06 - View
Brassica oleracea BolC5t31172H C5 - View
Brassica rapa BraA07t31158Z A07 + View
Beta vulgaris EL10Ac6g13279 K03263 - translation initiation factor 5A (EIF5A) Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT64G2390 NC_044379.1 + View
Corylus avellana Haze_11946 Similar to Eukaryotic translation initiation factor 5A-3 (Solanum lycopersicum OX%3D4081) 9 + View
Coffea canephora Cc11_g12450 Eukaryotic translation initiation factor 5A chr11 - View
Citrus clementina Ciclev10022624m.g scaffold_3 - View
Citrus clementina Ciclev10032956m.g scaffold_4 - View
Carpinus fangiana Cfa008918 Cfa03 + View
Cardamine hirsuta CARHR062290 Eukaryotic translation initiation factor 5A-1 Chr2 + View
Cardamine hirsuta CARHR025340 Eukaryotic translation initiation factor-5A Chr1 - View
Cardamine hirsuta CARHR014320 Eukaryotic translation initiation factor 5A-1 Chr1 + View
Carya illinoinensis CiPaw.05G128900 K03263 - translation initiation factor 5A (EIF5A) Chr05 + View
Citrullus lanatus ClCG05G023950 Eukaryotic translation initiation factor 5A CG_Chr05 + View
Cucumis melo MELO3C012131.2 eukaryotic translation initiation factor 5A-like chr10 + View
Corchorus olitorius COL.COLO4_27952 Translation elongation factor IF5A AWUE01019716.1 + View
Carica papaya Cpa.g.sc1.78 supercontig_1 - View
Chenopodium quinoa AUR62032854 Eukaryotic translation initiation factor 5A C_Quinoa_Scaffold_3751 - View
Chenopodium quinoa AUR62005862 Eukaryotic translation initiation factor 5A C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0001s2440 K03263 - translation initiation factor 5A (EIF5A) scaffold_1 - View
Capsella rubella Carub.0002s1601 K03263 - translation initiation factor 5A (EIF5A) scaffold_2 + View
Cucumis sativus L. CsaV3_5G033100 Eukaryotic translation initiation factor 5A chr5 - View
Daucus carota DCAR_030986 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_026031 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv38755 GWHABJS00000019 + View
Davidia involucrata Dinv16696 GWHABJS00000018 - View
Davidia involucrata Dinv34105 GWHABJS00000008 - View
Durio zibethinus Duzib268G1661 NW_019168270.1 + View
Durio zibethinus Duzib251G0601 NW_019167971.1 + View
Durio zibethinus Duzib205G1861 NW_019168381.1 - View
Durio zibethinus Duzib248G0022 NW_019168048.1 - View
Erigeron canadensis ECA233G0068 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.G02468 Chr07 + View
Erythranthe guttata Migut.E00065 scaffold_5 + View
Erythranthe guttata Migut.L01232 scaffold_12 + View
Eutrema salsugineum Thhalv10019263m.g K03263 - translation initiation factor 5A (EIF5A) scaffold_9 - View
Eutrema salsugineum Thhalv10008974m.g K03263 - translation initiation factor 5A (EIF5A) scaffold_5 + View
Eutrema salsugineum Thhalv10008978m.g K03263 - translation initiation factor 5A (EIF5A) scaffold_5 - View
Fragaria x ananassa FAN12G2550 K03263 - translation initiation factor 5A (EIF5A) Fvb4-3 - View
Fragaria vesca FvH4_4g30601 K03263 - translation initiation factor 5A (EIF5A) Fvb4 + View
Gossypium hirsutum Gohir.D12G166000 K03263 - translation initiation factor 5A (EIF5A) D12 + View
Gossypium hirsutum Gohir.A03G102900 K03263 - translation initiation factor 5A (EIF5A) A03 + View
Gossypium hirsutum Gohir.A12G162900 K03263 - translation initiation factor 5A (EIF5A) A12 + View
Glycine max Glyma.02G112400 K03263 - translation initiation factor 5A (EIF5A) Gm02 - View
Glycine max Glyma.06G197300 K03263 - translation initiation factor 5A (EIF5A) Gm06 - View
Glycine max Glyma.01G054000 K03263 - translation initiation factor 5A (EIF5A) Gm01 - View
Gossypium raimondii Gorai.008G178700 Chr08 + View
Gossypium raimondii Gorai.005G143800 Chr05 + View
Helianthus annuus HanXRQChr08g0211051 Putative translation elongation factor IF5A HanXRQChr08 + View
Helianthus annuus HanXRQChr12g0362701 Putative translation elongation factor IF5A HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0354F.1_g133720 Hma1.2p1_0354F.1 + View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134350 Hma1.2p1_0357F.1 - View
Lupinus albus Lalb_Chr10g0098511 K03263 - translation initiation factor 5A (EIF5A) Lalb_Chr10 - View
Lotus japonicus Lj2g0024435 K03263 - translation initiation factor 5A (EIF5A) chr2 - View
Malus domestica MD16G1066400 eukaryotic elongation factor 5A-1 Chr16 + View
Malus domestica MD13G1067300 eukaryotic elongation factor 5A-1 Chr13 + View
Manihot esculenta Manes.14G082350 Chromosome14 - View
Manihot esculenta Manes.05G107000 Chromosome05 - View
Medicago truncatula Medtr5g042990 eukaryotic translation initiation factor 5A4 chr5 - View
Nelumbo nucifera Nn4g23305 chr4 - View
Nelumbo nucifera Nn3g17355 chr3 - View
Nicotiana tabacum Nitab4.5_0000014g0240 Translation protein SH3-like domain, Ribosomal protein L2 domain 2, Translation elongation factor IF5A Nitab4.5_0000014 - View
Nicotiana tabacum Nitab4.5_0000720g0040 Ribosomal protein L2 domain 2, Nucleic acid-binding, OB-fold, Translation protein SH3-like domain, Translation elongation factor IF5A, Translation elongation factor, IF5A, hypusine site, Translation elongation factor, IF5A C-terminal Nitab4.5_0000720 + View
Nicotiana tabacum Nitab4.5_0000141g0010 Nucleic acid-binding, OB-fold, Translation elongation factor, IF5A, hypusine site, Ribosomal protein L2 domain 2, Translation elongation factor IF5A, Translation elongation factor, IF5A C-terminal, Translation protein SH3-like domain Nitab4.5_0000141 + View
Olea europaea Oeu021092.2 chr8 - View
Punica granatum PGR102G2771 NC_045129.1 - View
Punica granatum PGR119G1841 NC_045132.1 + View
Prunus persica Prupe.1G280900 K03263 - translation initiation factor 5A (EIF5A) Pp01 - View
Papaver somniferum PSO017G2022 NC_039362.1 - View
Papaver somniferum PSO478G4513 NC_039361.1 + View
Populus trichocarpa Potri.008G092000 K03263 - translation initiation factor 5A (EIF5A) Chr08 - View
Populus trichocarpa Potri.010G162800 K03263 - translation initiation factor 5A (EIF5A) Chr10 + View
Phaseolus vulgaris Phvul.002G090900 K03263 - translation initiation factor 5A (EIF5A) Chr02 + View
Quercus lobata QL10p017993 10 - View
Quercus lobata QL03p069981 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0439011 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0133400 chr12 - View
Striga asiatica SGA_v2.0_scaffold16G07744 scaffold16 - View
Striga asiatica SGA_v2.0_scaffold36G14414 scaffold36 + View
Salvia bowleyana SalBow8G4493 GWHASIU00000004 - View
Salix brachista Sabra08G0068900 GWHAAZH00000008 - View
Salix brachista Sabra10G0123800 GWHAAZH00000010 + View
Simmondsia chinensis Sc04g0007800 GWHAASQ00000004 + View
Sechium edule Sed0018846 LG06 + View
Sechium edule Sed0008566 LG07 - View
Solanum lycopersicum Solyc01g011000.3 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) SL4.0ch01 - View
Solanum lycopersicum Solyc04g005510.3 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A1U8HES8_CAPAN) SL4.0ch04 + View
Schrenkiella parvula Sp5g24460 K03263 - translation initiation factor 5A (EIF5A) ch5-6 + View
Schrenkiella parvula Sp1g22170 K03263 - translation initiation factor 5A (EIF5A) ch1-1 - View
Schrenkiella parvula Sp1g12310 K03263 - translation initiation factor 5A (EIF5A) ch1-1 + View
Solanum pennellii Sopen04g001530 Eukaryotic translation initiation factor 5A-4 (eIF-5A-4) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 Spenn-ch04 + View
Solanum pennellii Sopen01g006960 Eukaryotic translation initiation factor 5A-4 (eIF-5A-4) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400002819 Eukaryotic translation initiation factor 5A-4 ST4.03ch04 + View
Selenicereus undatus Hund25201 Scaffold_3410 + View
Trochodendron aralioides TAR374G0702 group12 + View
Trochodendron aralioides TAR371G1062 group13 - View
Trochodendron aralioides TAR622G0349 group8 + View
Theobroma cacao Thecc.02G338400 Eukaryotic elongation factor 5A-1 Chromosome_2 + View
Theobroma cacao Thecc.03G095100 Eukaryotic elongation factor 5A-1 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104801813 eukaryotic translation initiation factor 5A-4-like NW_010970030.1 - View
Tarenaya hassleriana THA.LOC104808630 eukaryotic translation initiation factor 5A-5 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104822030 eukaryotic translation initiation factor 5A NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104822903 eukaryotic translation initiation factor 5A-2-like NW_010966822.1 + View
Trifolium pratense TPR.G19942 Tp57577_TGAC_v2_scaf_329 - View
Tripterygium wilfordii TWI79G0038 NC_052238.1 + View
Vaccinium macrocarpon vmacro16356 Similar to Eukaryotic translation initiation factor 5A (Manihot esculenta OX%3D3983) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2219 CM024074.1 - View
Vitis vinifera GSVIVG01007954001 chr17 - View