Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G22040 LG-1 - View
Acer truncatum Atru.chr8.2552 chr8 + View
Actinidia chinensis Actinidia13107 Lachesis_group0 + View
Actinidia chinensis Actinidia05273 Lachesis_group20 - View
Arabidopsis lyrata AL6G12160 scaffold_6 + View
Amaranthus hybridus Ah.08g211940 E3 ubiquitin-protein ligase UPL4 (Ubiquitin-protein ligase 4) (EC 2.3.2.26) (HECT-type E3 ubiquitin transferase UPL4) AmaHy_arrow1_Scaffold_8 - View
Arabidopsis thaliana AT5G02880 ubiquitin-protein ligase 4 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. ubiquitin-protein ligase 4 (UPL4)%3B CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%2C HECT (InterPro:IPR000569)%3B BEST Arabidopsis thaliana protein match is: HEAT repeat %3BHECT-domain (ubiquitin-transferase) (TAIR:AT4G38600.1)%3B Has 5635 Blast hits to 5003 proteins in 272 species: Archae - 0%3B Bacteria - 11%3B Metazoa - 3196%3B Fungi - 992%3B Plants - 513%3B Viruses - 0%3B Other Eukaryotes - 923 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC03g13042 ChrC03 - View
Brassica carinata BcaB01g05869 ChrB01 - View
Brassica carinata BcaB05g21863 ChrB05 - View
Brassica napus A03p00950 A03 + View
Brassica napus C02p00700 C02 + View
Brassica napus C03p01230 C03 + View
Brassica oleracea BolC3t12682H C3 + View
Brassica oleracea BolC2t06068H C2 + View
Brassica rapa BraA03t09477Z A03 + View
Brassica rapa BraA02t04733Z A02 + View
Cannabis sativa CANSAT80G1184 NC_044372.1 + View
Cicer arietinum L. Ca_11447_v3 Ca_LG4_v3 + View
Coffea canephora Cc06_g03520 E3 ubiquitin-protein ligase UPL4 chr6 + View
Citrus clementina Ciclev10010897m.g scaffold_6 - View
Ceratophyllum demersum CDE02G3980 1 - View
Ceratophyllum demersum CDE09G0934 7 + View
Carpinus fangiana Cfa017503 Cfa07 + View
Cardamine hirsuta CARHR210440 Ubiquitin-protein ligase 4 Chr6 - View
Carya illinoinensis CiPaw.09G180200 PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Chr09 - View
Citrullus lanatus ClCG10G020580 Pentatricopeptide repeat-containing protein, putative CG_Chr10 - View
Cucumis melo MELO3C009310.2 E3 ubiquitin-protein ligase UPL4 chr04 - View
Corchorus olitorius COL.COLO4_27086 E3 ubiquitin-protein ligase AWUE01019427.1 - View
Carica papaya Cpa.g.sc114.47 supercontig_114 - View
Chenopodium quinoa AUR62040018 UPL4: E3 ubiquitin-protein ligase UPL4 C_Quinoa_Scaffold_4471 + View
Capsella rubella Carub.0006s0169 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 scaffold_6 + View
Cucumis sativus L. CsaV3_3G035510 E3 ubiquitin-protein ligase UPL4 chr3 + View
Daucus carota DCAR_017728 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv37248 GWHABJS00000021 - View
Durio zibethinus Duzib093G1340 NW_019167937.1 - View
Erigeron canadensis ECA248G3606 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.A01178 Chr01 + View
Erythranthe guttata Migut.J00412 scaffold_10 + View
Eutrema salsugineum Thhalv10012430m.g scaffold_2 + View
Fragaria x ananassa FAN09G0078 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Fvb6-2 - View
Fragaria x ananassa FAN14G0414 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb6-1 - View
Fragaria x ananassa FAN02G0677 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb6-4 + View
Fragaria x ananassa FAN05G5612 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) Fvb6-3 - View
Fragaria vesca FvH4_6g15270 PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Fvb6 + View
Gossypium hirsutum Gohir.D04G115800 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) D04 - View
Gossypium hirsutum Gohir.A04G076800 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) A04 - View
Glycine max Glyma.10G049100 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Gm10 + View
Glycine max Glyma.13G136900 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Gm13 + View
Gossypium raimondii Gorai.009G420400 Chr09 - View
Lupinus albus Lalb_Chr02g0153631 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Lalb_Chr02 + View
Lotus japonicus Lj5g0017747 K10590 - E3 ubiquitin-protein ligase TRIP12 (TRIP12) chr5 - View
Lonicera japonica Lj3A979T60 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_1_53840 Lsat_1_v8_lg_1 - View
Malus domestica MD04G1104600 ubiquitin-protein ligase 4 Chr04 - View
Malus domestica MD12G1124500 ubiquitin-protein ligase 4 Chr12 - View
Manihot esculenta Manes.08G003000 Chromosome08 + View
Medicago truncatula Medtr1g066920 E3 ubiquitin-protein ligase, putative chr1 - View
Medicago truncatula Medtr7g100660 E3 ubiquitin-protein ligase UPL3, putative chr7 + View
Olea europaea Oeu060083.1 scaffold83 + View
Petunia axillaris Peaxi162Scf00005g04714 ubiquitin-protein ligase 4 Peaxi162Scf00005 - View
Punica granatum PGR004G0394 NC_045131.1 - View
Prunus persica Prupe.6G241700 PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Pp06 - View
Papaver somniferum PSO339G6320 NC_039366.1 - View
Populus trichocarpa Potri.016G085200 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Chr16 + View
Populus trichocarpa Potri.006G132000 PTHR11254//PTHR11254:SF350 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE UPL4 Chr06 - View
Phaseolus vulgaris Phvul.007G163300 PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Chr07 + View
Quercus lobata QL07p045315 7 - View
Rhododendron simsii Rhsim04G0151600 chr04 - View
Striga asiatica SGA_v2.0_scaffold126G33893 scaffold126 + View
Salix brachista Sabra06G0103600 GWHAAZH00000006 - View
Simmondsia chinensis Sc20g0004120 GWHAASQ00000020 - View
Solanum lycopersicum Solyc09g007310.3 E3 ubiquitin-protein ligase UPL4 (AHRD V3.3 *** A0A2G2YQF0_CAPAN) SL4.0ch09 + View
Schrenkiella parvula Sp6g39710 PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 ch6-6 - View
Solanum pennellii Sopen09g002190 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | ubiquitin-protein ligase 4 (UPL4) | CONTAINS InterPro DOMAIN/s: Armadillo-like helical , Armadillo-type fold , HECT | BEST Arabidopsis thaliana protein match is: HEAT repeat , HECT-domain (ubiquitin-transferase) Spenn-ch09 + View
Selenicereus undatus Hund20155 Scaffold_33673 + View
Trochodendron aralioides TAR636G1431 group1 - View
Trochodendron aralioides TAR633G0466 group2 + View
Trochodendron aralioides TAR623G1582 group7 - View
Theobroma cacao Thecc.05G053500 Ubiquitin protein ligase E3a Chromosome_5 + View
Tarenaya hassleriana THA.LOC104816317 E3 ubiquitin-protein ligase UPL4 NW_010965775.1 + View
Tripterygium wilfordii TWI53G0206 NC_052244.1 - View
Tripterygium wilfordii TWI74G1448 NC_052234.1 + View
Utricularia gibba unitig_744.g24671 unitig_744 + View
Vaccinium macrocarpon vmacro08696 Similar to UPL4: E3 ubiquitin-protein ligase UPL4 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1263 CM024071.1 - View
Vitis vinifera GSVIVG01025537001 chr8 + View