Gene: AT5G02880

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G02880
  • Transcript Identifier AT5G02880.2
  • Gene Type Coding gene
  • Location Chr5 : 662643-668667 : positive

Gene Family Information

  • ID HOM05D001673
  • #Genes/#Species 386/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G02880.2
  • symbol UPL4
  • uniprot Q9LYZ7

Descriptions

  • Description ubiquitin-protein ligase 4
  • Computational description ubiquitin-protein ligase 4 (UPL4); CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), HECT (InterPro:IPR000569); BEST Arabidopsis thaliana protein match is: HEAT repeat ;HECT-domain (ubiquitin-transferase) (TAIR:AT4G38600.1); Has 5635 Blast hits to 5003 proteins in 272 species: Archae - 0; Bacteria - 11; Metazoa - 3196; Fungi - 992; Plants - 513; Viruses - 0; Other Eukaryotes - 923 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISS
IEA
Gene Ontologyprotein ubiquitination1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
ISS
IEA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0000151
ISS
Gene Ontologyubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR035983 HECT, E3 ligase catalytic domain
IPR000569 HECT domain
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)