Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019490 hypothetical protein F383_12676 [Gossypium arboreum] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15900 LG-5 - View
Actinidia chinensis Actinidia24337 Lachesis_group24 + View
Actinidia chinensis Actinidia16811 Lachesis_group12 - View
Actinidia chinensis Actinidia35562 Lachesis_group2 - View
Actinidia chinensis Actinidia32230 Lachesis_group19 + View
Arabidopsis lyrata AL3G16100 scaffold_3 + View
Avicennia marina MSTRG.27982 ScioBoG_94932_HRSCAF_95134 + View
Aquilegia oxysepala Aqoxy5G00725 CHR05 + View
Arabidopsis thaliana AT3G05500 Rubber elongation factor protein (REF) Encodes a protein that associates with lipid droplet surfaces. Rubber elongation factor protein (REF)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802)%3B BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1)%3B Has 129 Blast hits to 129 proteins in 22 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 129%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0796G074 AmTr_v1.0_scaffold00045 + View
Brassica carinata BcaC05g30116 ChrC05 - View
Brassica carinata BcaC09g47829 ChrC09 + View
Brassica napus BNapus_Darmor_BZH_scaffold_114p00030 BNapus_Darmor_BZH_scaffold_114 - View
Brassica napus C05p61720 C05 - View
Brassica oleracea BolC5t34831H C5 - View
Brassica oleracea BolC1t05692H C1 - View
Brassica rapa BraSC132t45501Z Brapa_scaffold_132 - View
Beta vulgaris EL10Ac4g09918 PF05755 - Rubber elongation factor protein (REF) (REF) Chr4_EL10_PGA_scaffold1 - View
Capsicum annuum CAN.G339.29 PGAv.1.6.scaffold339 - View
Capsicum annuum CAN.G1459.8 PGAv.1.6.scaffold1459 + View
Cannabis sativa CANSAT54G0666 NC_044375.1 + View
Corylus avellana Haze_04142 Similar to At3g05500: REF/SRPP-like protein At3g05500 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g20690 Stress-related protein chr1 + View
Citrus clementina Ciclev10003772m.g scaffold_5 + View
Citrus clementina Ciclev10022084m.g scaffold_3 + View
Ceratophyllum demersum CDE05G1419 3 - View
Ceratophyllum demersum CDE11G1119 9 - View
Carpinus fangiana Cfa006626 Cfa02 + View
Carpinus fangiana Cfa005942 Cfa02 - View
Cardamine hirsuta CARHR079890 Rubber elongation factor protein (REF) Chr3 + View
Carya illinoinensis CiPaw.08G162100 PF05755 - Rubber elongation factor protein (REF) (REF) Chr08 - View
Carya illinoinensis CiPaw.07G021300 PF05755 - Rubber elongation factor protein (REF) (REF) Chr07 + View
Citrullus lanatus ClCG03G017110 Rubber elongation factor CG_Chr03 + View
Cucumis melo MELO3C015310.2 Rubber elongation factor protein (REF) chr02 - View
Corchorus olitorius COL.COLO4_10516 Rubber elongation factor AWUE01014526.1 + View
Carica papaya Cpa.g.sc9.214 supercontig_9 + View
Carica papaya Cpa.g.sc48.93 supercontig_48 + View
Chenopodium quinoa AUR62000766 SRP: Stress-related protein C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62005203 SRP: Stress-related protein C_Quinoa_Scaffold_3820 + View
Capsella rubella Carub.0003s0479 PF05755 - Rubber elongation factor protein (REF) (REF) scaffold_3 + View
Cucumis sativus L. CsaV3_1G038850 Rubber elongation factor protein (REF) chr1 - View
Daucus carota DCAR_022147 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_003355 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_002819 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv30806 GWHABJS00000002 + View
Davidia involucrata Dinv40340 GWHABJS00000005 + View
Durio zibethinus Duzib177G1003 NW_019168004.1 + View
Durio zibethinus Duzib133G1257 NW_019167938.1 - View
Durio zibethinus Duzib106G1680 NW_019168492.1 - View
Durio zibethinus Duzib128G1195 NW_019168481.1 - View
Eucalyptus grandis Eucgr.B01915 Chr02 - View
Eucalyptus grandis Eucgr.K03465 Chr11 + View
Erythranthe guttata Migut.N02080 scaffold_14 + View
Eutrema salsugineum Thhalv10021402m.g PF05755 - Rubber elongation factor protein (REF) (REF) scaffold_13 - View
Fragaria x ananassa FAN15G2501 PF05755 - Rubber elongation factor protein (REF) (REF) Fvb2-4 + View
Fragaria x ananassa FAN14G4146 PF05755 - Rubber elongation factor protein (REF) (REF) Fvb6-1 - View
Fragaria x ananassa FAN02G1573 PF05755 - Rubber elongation factor protein (REF) (REF) Fvb6-4 + View
Fragaria x ananassa FAN27G2431 PF05755 - Rubber elongation factor protein (REF) (REF) Fvb2-1 + View
Fragaria vesca FvH4_6g06530 PF05755 - Rubber elongation factor protein (REF) (REF) Fvb6 + View
Gossypium hirsutum Gohir.A11G294800 PF05755 - Rubber elongation factor protein (REF) (REF) A11 + View
Gossypium hirsutum Gohir.A11G267900 PF05755 - Rubber elongation factor protein (REF) (REF) A11 + View
Gossypium hirsutum Gohir.D11G309500 PF05755 - Rubber elongation factor protein (REF) (REF) D11 - View
Gossypium hirsutum Gohir.A12G131800 PF05755 - Rubber elongation factor protein (REF) (REF) A12 - View
Gossypium hirsutum Gohir.D12G135466 PF05755 - Rubber elongation factor protein (REF) (REF) D12 - View
Gossypium hirsutum Gohir.D11G277800 PF05755 - Rubber elongation factor protein (REF) (REF) D11 + View
Gossypium raimondii Gorai.008G146600 Chr08 - View
Gossypium raimondii Gorai.007G300000 Chr07 + View
Gossypium raimondii Gorai.007G341500 Chr07 - View
Hydrangea macrophylla Hma1.2p1_1212F.1_g267280 Hma1.2p1_1212F.1 - View
Lonicera japonica Lj1A28T43 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_9_87781 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI19_g12137_MAGBIO AED:0.08 Chr19 - View
Magnolia biondii MBI18_g21821_MAGBIO AED:0.03 Chr18 - View
Malus domestica MD11G1305000 Rubber elongation factor protein (REF) Chr11 + View
Malus domestica MD04G1201000 Rubber elongation factor protein (REF) Chr04 - View
Malus domestica MD12G1213500 Rubber elongation factor protein (REF) Chr12 - View
Manihot esculenta Manes.08G117800 Chromosome08 - View
Manihot esculenta Manes.05G063700 Chromosome05 - View
Manihot esculenta Manes.09G170000 Chromosome09 + View
Nelumbo nucifera Nn3g21444 chr3 + View
Nicotiana tabacum Nitab4.5_0003658g0030 Rubber elongation factor Nitab4.5_0003658 + View
Olea europaea Oeu012117.1 chr13 - View
Oryza sativa ssp. japonica Os07g0671800 Similar to Stress-related protein-like protein (Fragment). chr07 + View
Petunia axillaris Peaxi162Scf00037g01117 Rubber elongation factor protein (REF) Peaxi162Scf00037 + View
Punica granatum PGR083G1598 NC_045133.1 - View
Punica granatum PGR044G2695 NC_045134.1 + View
Prunus persica Prupe.8G258700 PF05755 - Rubber elongation factor protein (REF) (REF) Pp08 + View
Prunus persica Prupe.6G321100 PF05755 - Rubber elongation factor protein (REF) (REF) Pp06 - View
Papaver somniferum PSO210G0621 NC_039359.1 + View
Papaver somniferum PSO832G1773 NC_039367.1 - View
Populus trichocarpa Potri.005G025700 PF05755 - Rubber elongation factor protein (REF) (REF) Chr05 - View
Populus trichocarpa Potri.013G017300 PF05755 - Rubber elongation factor protein (REF) (REF) Chr13 - View
Populus trichocarpa Potri.002G206000 PF05755 - Rubber elongation factor protein (REF) (REF) Chr02 - View
Quercus lobata QL03p021016 3 - View
Quercus lobata QL03p021851 3 + View
Rosa chinensis RcHm_v2.0_Chr3g0455691 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim13G0012200 chr13 - View
Salix brachista Sabra13G0016300 GWHAAZH00000013 - View
Salix brachista Sabra02G0153400 GWHAAZH00000002 + View
Salix brachista Sabra13G0020300 GWHAAZH00000013 - View
Simmondsia chinensis Sc16g0008650 GWHAASQ00000016 + View
Sechium edule Sed0021381 LG04 + View
Sapria himalayana SHI18106 scaffold26_7557582 - View
Solanum lycopersicum Solyc01g099680.3 Rubber elongation factor (AHRD V3.3 *** A0A2U1LDB4_ARTAN) SL4.0ch01 + View
Solanum lycopersicum Solyc09g074930.3 REF/SRPP-like protein (AHRD V3.3 *** A0A2G3CTD5_CAPCH) SL4.0ch09 + View
Schrenkiella parvula Sp3g04330 PF05755 - Rubber elongation factor protein (REF) (REF) ch3-1 + View
Solanum pennellii Sopen01g043190 Rubber elongation factor, Rubber elongation factor protein (REF) | INVOLVED IN: biological_process unknown | LOCATED IN: vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Rubber elongation factor | BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) Spenn-ch01 + View
Solanum pennellii Sopen09g029750 Rubber elongation factor protein (REF) | INVOLVED IN: biological_process unknown | LOCATED IN: vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Rubber elongation factor | BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400024708 Rubber elongation factor protein ST4.03ch01 + View
Selenicereus undatus Hund21709 Scaffold_33680 + View
Selenicereus undatus Hund07095 Scaffold_33676 + View
Trochodendron aralioides TAR636G1635 group1 - View
Trochodendron aralioides TAR633G0028 group2 + View
Theobroma cacao Thecc.05G312700 Rubber elongation factor Chromosome_5 + View
Theobroma cacao Thecc.01G297600 Rubber elongation factor Chromosome_1 + View
Tarenaya hassleriana THA.LOC104817620 REF/SRPP-like protein At2g47780 NW_010965946.1 + View
Tripterygium wilfordii TWI59G0901 NC_052248.1 - View
Tripterygium wilfordii TWI12G1324 NC_052243.1 + View
Tripterygium wilfordii TWI14G0138 NC_052249.1 - View
Tripterygium wilfordii TWI56G0117 NC_052242.1 - View
Utricularia gibba unitig_21.g20040 unitig_21 - View
Vaccinium macrocarpon vmacro02465 Similar to SRP: Stress-related protein (Vitis riparia OX%3D96939) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vanilla planifolia HPP92_006924 Rubber elongation factor protein (REF) *-* CM028152.1 - View
Vitis vinifera GSVIVG01031148001 chr14 - View
Vitis vinifera GSVIVG01027980001 chr7 + View