Gene: AT3G05500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G05500
  • Transcript Identifier AT3G05500.1
  • Gene Type Coding gene
  • Location Chr3 : 1593540-1594802 : positive

Gene Family Information

  • ID HOM05D001483
  • #Genes/#Species 428/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G05500.1
  • uniprot Q9MA63

Descriptions

  • Description Rubber elongation factor protein (REF)
  • Computational description Rubber elongation factor protein (REF); INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rubber elongation factor (InterPro:IPR008802); BEST Arabidopsis thaliana protein match is: Rubber elongation factor protein (REF) (TAIR:AT2G47780.1); Has 129 Blast hits to 129 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019915
IDA
Gene Ontologylipid storage1
GO:0034389
IMP
Gene Ontologylipid droplet organization2
GO:0045927
IMP
Gene Ontologypositive regulation of growth2
GO:0080186
IMP
Gene Ontologydevelopmental vegetative growth2
GO:1902584
IMP
Gene Ontologypositive regulation of response to water deprivation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0000325
HDA
Gene Ontologyplant-type vacuole4
GO:0005811
IDA
Gene Ontologylipid droplet1
GO:0005773
IDA
GOA Databasevacuole

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008802 Rubber elongation factor
Mapman id Description
5.9.5 Lipid metabolism.lipid droplet-associated activities.associated factor (LDAP)