Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G13420 LG-1 - View
Acer truncatum Atru.chr3.3064 chr3 + View
Actinidia chinensis Actinidia22455 Lachesis_group9 - View
Actinidia chinensis Actinidia06346 Lachesis_group15 - View
Arabidopsis lyrata AL6G32960 scaffold_6 + View
Avicennia marina MSTRG.12400 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.17670 ScioBoG_19834_HRSCAF_19925 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RJEI5H PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT5G22000 RING-H2 group F2A encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. RING-H2 group F2A (RHF2A)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: regulation of cell cycle%2C proteolysis involved in cellular protein catabolic process%2C megagametogenesis%2C microgametogenesis%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING-H2 group F1A (TAIR:AT4G14220.1)%3B Has 8011 Blast hits to 5867 proteins in 317 species: Archae - 0%3B Bacteria - 141%3B Metazoa - 1822%3B Fungi - 396%3B Plants - 2620%3B Viruses - 42%3B Other Eukaryotes - 2990 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0697G017 AmTr_v1.0_scaffold00004 + View
Brassica carinata BcaB08g36459 ChrB08 - View
Brassica carinata BcaC01g06614 ChrC01 - View
Brassica napus C09p54680 C09 - View
Brassica napus C03p12100 C03 + View
Brassica oleracea BolC3t13682H C3 + View
Brassica rapa BraA02t05634Z A02 + View
Beta vulgaris EL10Ac7g16266 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G1463.19 PGAv.1.6.scaffold1463 - View
Cicer arietinum L. Ca_01620_v3 Ca_LG1_v3 + View
Corylus avellana Haze_23601 Similar to RHF2A: E3 ubiquitin-protein ligase RHF2A (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_20115 Similar to RHF2A: E3 ubiquitin-protein ligase RHF2A (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc01_g07960 E3 ubiquitin-protein ligase RHF2A chr1 - View
Citrus clementina Ciclev10030283m.g scaffold_8 + View
Ceratophyllum demersum CDE06G0483 4 + View
Ceratophyllum demersum CDE07G0231 5 - View
Cardamine hirsuta CARHR191530 RING finger protein Chr6 - View
Carya illinoinensis CiPaw.13G126300 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr13 - View
Corchorus olitorius COL.COLO4_25365 Zinc finger%2C RING-type AWUE01019010.1 - View
Carica papaya Cpa.g.sc103.49 supercontig_103 + View
Chenopodium quinoa AUR62001579 RHF2A: E3 ubiquitin-protein ligase RHF2A C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62020203 RHF2A: E3 ubiquitin-protein ligase RHF2A C_Quinoa_Scaffold_2465 + View
Capsella rubella Carub.0006s1964 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Daucus carota DCAR_012255 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv18865 GWHABJS00000413 - View
Davidia involucrata Dinv32153 GWHABJS00000010 + View
Durio zibethinus Duzib150G0974 NW_019167882.1 + View
Durio zibethinus Duzib170G1053 NW_019167871.1 - View
Eucalyptus grandis Eucgr.J00594 Chr10 - View
Erythranthe guttata Migut.N02434 scaffold_14 + View
Eutrema salsugineum Thhalv10013828m.g PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria x ananassa FAN21G1431 K19043 - E3 ubiquitin-protein ligase RHF [EC:6.3.2.19] (RHF) Fvb3-2 - View
Fragaria x ananassa FAN16G0017 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN25G3558 K19043 - E3 ubiquitin-protein ligase RHF [EC:6.3.2.19] (RHF) Fvb3-1 - View
Fragaria x ananassa FAN11G2970 K19043 - E3 ubiquitin-protein ligase RHF [EC:6.3.2.19] (RHF) Fvb3-4 + View
Fragaria vesca FvH4_3g26760 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb3 - View
Gossypium hirsutum Gohir.D05G080000 K19043 - E3 ubiquitin-protein ligase RHF [EC:6.3.2.19] (RHF) D05 - View
Glycine max Glyma.13G310900 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.12G190800 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm12 - View
Gossypium raimondii Gorai.009G081600 Chr09 - View
Helianthus annuus HanXRQChr13g0398701 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr13 - View
Hydrangea macrophylla Hma1.2p1_1811F.1_g303635 Hma1.2p1_1811F.1 + View
Lotus japonicus Lj3g0010881 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Malus domestica MD03G1160200 RING-H2 group F2A Chr03 - View
Malus domestica MD11G1176400 RING-H2 group F2A Chr11 - View
Manihot esculenta Manes.11G103900 Chromosome11 - View
Medicago truncatula Medtr2g087820 E3 ubiquitin-protein ligase RHF2A-like protein chr2 - View
Nelumbo nucifera Nn6g34594 chr6 + View
Nicotiana tabacum Nitab4.5_0002426g0090 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0002426 + View
Nicotiana tabacum Nitab4.5_0000875g0070 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000875 + View
Olea europaea Oeu048820.2 scaffold528 + View
Petunia axillaris Peaxi162Scf00098g01531 RING-H2 group F2A Peaxi162Scf00098 - View
Punica granatum PGR119G0678 NC_045132.1 + View
Prunus persica Prupe.6G148500 K19043 - E3 ubiquitin-protein ligase RHF [EC:6.3.2.19] (RHF) Pp06 - View
Pisum sativum Psat5g262920 Cellular macromolecule metabolic process chr5LG3 - View
Papaver somniferum PSO384G3357 NC_039368.1 - View
Papaver somniferum PSO384G4975 NC_039368.1 - View
Populus trichocarpa Potri.001G213800 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Populus trichocarpa Potri.016G066400 PTHR22763//PTHR22763:SF19 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr16 + View
Phaseolus vulgaris Phvul.005G117400 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Quercus lobata QL01p019030 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0049191 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim01G0198900 chr01 + View
Simmondsia chinensis Sc12g0000440 GWHAASQ00000012 - View
Simmondsia chinensis Sc21g0006710 GWHAASQ00000021 + View
Sechium edule Sed0017380 LG12 - View
Solanum lycopersicum Solyc06g073860.2 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1PQ21_ARTAN) SL4.0ch06 + View
Schrenkiella parvula Sp6g23190 PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Solanum pennellii Sopen06g030260 encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. | RING-H2 group F2A (RHF2A) | FUNCTIONS IN: zinc ion binding | INVOLVED IN: regulation of cell cycle, proteolysis involved in cellular protein catabolic process, megagametogenesis, microgametogenesis | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING-H2 group F1A Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG402005938 Zinc ion binding protein ST4.03ch06 + View
Selenicereus undatus Hund18813 Scaffold_33675 - View
Selenicereus undatus Hund20964 Scaffold_33673 - View
Trochodendron aralioides TAR636G2464 group1 - View
Trochodendron aralioides TAR633G2666 group2 + View
Trochodendron aralioides TAR369G0810 group18 - View
Theobroma cacao Thecc.09G268400 RING-H2 group F2A Chromosome_9 - View
Tarenaya hassleriana THA.LOC104810949 E3 ubiquitin-protein ligase RHF2A isoform X1 NW_010965304.1 - View
Trifolium pratense TPR.G4219 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI79G0675 NC_052238.1 - View
Vaccinium macrocarpon vmacro14309 Similar to RHF2A: E3 ubiquitin-protein ligase RHF2A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01037523001 chr6 - View