Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0021786 PREDICTED: protein FLOWERING LOCUS D isoform X1 [Vitis vinifera] Contig1010 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2970 LG-3 + View
Acer truncatum Atru.chr12.847 chr12 + View
Actinidia chinensis Actinidia38869 Lachesis_group17 - View
Arabidopsis lyrata AL3G21720 scaffold_3 + View
Avicennia marina MSTRG.9149 ScioBoG_11560_HRSCAF_11609 - View
Aquilegia oxysepala Aqoxy1G01138 CHR01 - View
Arabidopsis thaliana AT3G10390 protein FLOWERING locus D-like protein Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin%2C up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. FLOWERING LOCUS D (FLD)%3B FUNCTIONS IN: primary amine oxidase activity%3B INVOLVED IN: vegetative to reproductive phase transition of meristem%2C positive regulation of flower development%2C histone deacetylation%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937)%2C SWIRM (InterPro:IPR007526)%3B BEST Arabidopsis thaliana protein match is: LSD1-like 1 (TAIR:AT1G62830.1)%3B Has 6633 Blast hits to 6189 proteins in 1142 species: Archae - 35%3B Bacteria - 2778%3B Metazoa - 1469%3B Fungi - 560%3B Plants - 667%3B Viruses - 0%3B Other Eukaryotes - 1124 (source: NCBI BLink). Chr3 + View
Brassica napus C03p44110 C03 + View
Cannabis sativa CANSAT56G1841 NC_044371.1 + View
Corylus avellana Haze_16741 Similar to FLD: Protein FLOWERING LOCUS D (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g10900 Lysine-specific histone demethylase 1 homolog 3 chr2 - View
Citrus clementina Ciclev10030820m.g scaffold_4 + View
Carpinus fangiana Cfa001807 Cfa01 - View
Cardamine hirsuta CARHR084870 Lysine-specific histone demethylase 1 Chr3 + View
Carya illinoinensis CiPaw.02G172000 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Chr02 - View
Citrullus lanatus ClCG08G007730 Lysine-specific histone demethylase 1-3-like protein CG_Chr08 + View
Cucumis melo MELO3C019826.2 Lysine-specific histone demethylase 1-like protein chr03 - View
Capsella rubella Carub.0003s0957 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 scaffold_3 + View
Cucumis sativus L. CsaV3_6G036720 Lysine-specific histone demethylase 1-like protein chr6 + View
Daucus carota DCAR_006413 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv31235 GWHABJS00000004 - View
Durio zibethinus Duzib114G0428 NW_019167926.1 + View
Erigeron canadensis ECA233G3538 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.G02868 Chr07 - View
Erythranthe guttata Migut.F01954 scaffold_6 - View
Fragaria x ananassa FAN01G1111 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) Fvb7-4 + View
Fragaria x ananassa FAN03G3029 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) Fvb7-3 + View
Fragaria x ananassa FAN06G2768 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) Fvb7-2 - View
Fragaria x ananassa FAN10G3101 PF01593//PF04433//PF13450 - Flavin containing amine oxidoreductase (Amino_oxidase) // SWIRM domain (SWIRM) // NAD(P)-binding Rossmann-like domain (NAD_binding_8) Fvb7-1 - View
Fragaria x ananassa FAN06G2076 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) Fvb7-2 - View
Fragaria vesca FvH4_7g18750 PTHR10742//PTHR10742:SF260 - AMINE OXIDASE // LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Fvb7 - View
Gossypium hirsutum Gohir.D06G175700 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) D06 + View
Gossypium hirsutum Gohir.A05G293100 K11450 - lysine-specific histone demethylase 1 [EC:1.-.-.-] (AOF2, LSD1) A05 + View
Gossypium raimondii Gorai.010G206000 Chr10 + View
Gossypium raimondii Gorai.009G310400 Chr09 + View
Helianthus annuus HanXRQChr08g0218521 Probable flavin containing amine oxidoreductase family protein HanXRQChr08 - View
Hydrangea macrophylla Hma1.2p1_0145F.1_g065380 Hma1.2p1_0145F.1 - View
Lactuca sativa Lsat_1_v5_gn_8_20820 Lsat_1_v8_lg_8 - View
Malus domestica MD07G1169700 Flavin containing amine oxidoreductase family protein Chr07 - View
Malus domestica MD01G1103000 Flavin containing amine oxidoreductase family protein Chr01 - View
Nicotiana tabacum Nitab4.5_0000096g0320 SWIRM domain, Homeodomain-like, Amine oxidase, Winged helix-turn-helix DNA-binding domain Nitab4.5_0000096 - View
Olea europaea Oeu013842.1 chr13 + View
Petunia axillaris Peaxi162Scf00176g01518 Lysine-specific histone demethylase 1 homolog 3 Peaxi162Scf00176 + View
Punica granatum PGR142G1866 NC_045128.1 - View
Prunus persica Prupe.2G208600 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Pp02 - View
Papaver somniferum PSO339G0701 NC_039366.1 + View
Papaver somniferum PSO063G5841 NC_039364.1 + View
Populus trichocarpa Potri.008G035200 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Chr08 - View
Populus trichocarpa Potri.010G227200 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Chr10 + View
Quercus lobata QL08p054300 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0362561 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0148200 chr09 - View
Rhododendron simsii RhsimUnG0185600 ctg463 - View
Striga asiatica SGA_v2.0_scaffold62G21385 scaffold62 - View
Salvia bowleyana SalBow4G1586 GWHASIU00000008 + View
Salix brachista Sabra08G0023500 GWHAAZH00000008 - View
Salix brachista Sabra10G0175300 GWHAAZH00000010 + View
Sechium edule Sed0015646 LG03 - View
Solanum lycopersicum Solyc05g055590.2 lysine-specific histone demethylase 1 homolog 1 (AHRD V3.3 *** A0A2I4HTG5_9ROSI) SL4.0ch05 - View
Solanum lycopersicum Solyc11g008320.3 Lysine-specific histone demethylase 1-like protein 3 (AHRD V3.3 *** A0A1U8F4Y3_CAPAN) SL4.0ch11 - View
Schrenkiella parvula Sp3g08660 PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 ch3-1 + View
Solanum pennellii Sopen05g034030 Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. | FLOWERING LOCUS D (FLD) | FUNCTIONS IN: primary amine oxidase activity | INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Amine oxidase , SWIRM | BEST Arabidopsis thaliana protein match is: LSD1-like 1 Spenn-ch05 + View
Solanum pennellii Sopen11g004040 Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis. | FLOWERING LOCUS D (FLD) | FUNCTIONS IN: primary amine oxidase activity | INVOLVED IN: vegetative to reproductive phase transition of meristem, positive regulation of flower development, histone deacetylation | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Amine oxidase , SWIRM | BEST Arabidopsis thaliana protein match is: LSD1-like 1 Spenn-ch11 + View
Solanum tuberosum PGSC0003DMG400007432 Amine oxidase ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400023479 Amine oxidase ST4.03ch05 + View
Trochodendron aralioides TAR623G0154 group7 + View
Theobroma cacao Thecc.10G083900 Flavin containing amine oxidoreductase family protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816428 protein FLOWERING LOCUS D NW_010965775.1 + View
Tripterygium wilfordii TWI38G0024 NC_052252.1 - View
Vaccinium macrocarpon vmacro04841 Similar to FLD: Protein FLOWERING LOCUS D (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01016218001 chr13 + View