Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0004594 PREDICTED: uncharacterized protein LOC100251323 [Vitis vinifera] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G580 LG-2 - View
Acer truncatum Atru.chr5.413 chr5 - View
Acer truncatum Atru.chr9.1547 chr9 - View
Actinidia chinensis Actinidia14527 Lachesis_group6 + View
Actinidia chinensis Actinidia02037 Lachesis_group23 + View
Arabidopsis lyrata AL7G30460 scaffold_7 + View
Arabidopsis lyrata AL6G46330 scaffold_6 + View
Avicennia marina MSTRG.12015 ScioBoG_17730_HRSCAF_17811 + View
Amaranthus hybridus Ah.12g057580 Plant UBX domain-containing protein 8 (PUX8) (Ara4-interacting protein) (Suppressor of ARA4-induced defect of ypt1) (SAY1) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy7G00426 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.00WUVK PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2WQF85 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G11740 Ubiquitin-like superfamily protein Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. SAY1%3B INVOLVED IN: vesicle-mediated transport%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012)%2C Ubiquitin interacting motif (InterPro:IPR003903)%2C UBA-like (InterPro:IPR009060)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G23040.1)%3B Has 5504 Blast hits to 4000 proteins in 512 species: Archae - 3%3B Bacteria - 644%3B Metazoa - 2099%3B Fungi - 780%3B Plants - 360%3B Viruses - 48%3B Other Eukaryotes - 1570 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G23040 Ubiquitin-like superfamily protein Ubiquitin-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytosol%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012)%2C UBA-like (InterPro:IPR009060)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0757G204 AmTr_v1.0_scaffold00069 + View
Brassica carinata BcaB01g01676 ChrB01 + View
Brassica carinata BcaC03g16334 ChrC03 - View
Brassica napus A02p26030 A02 - View
Brassica napus C09p34700 C09 - View
Brassica napus A09p27380 A09 - View
Brassica napus C02p41530 C02 - View
Brassica oleracea BolC9t56316H C9 - View
Brassica oleracea BolC2t10170H C2 - View
Brassica rapa BraA02t07602Z A02 - View
Brassica rapa BraA09t38307Z A09 - View
Beta vulgaris EL10Ac5g12735 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Chr5_EL10_PGA_scaffold2 - View
Capsicum annuum CAN.G981.24 PGAv.1.6.scaffold981 + View
Cannabis sativa CANSAT21G2344 NC_044374.1 + View
Cannabis sativa CANSAT56G1884 NC_044371.1 + View
Cicer arietinum L. Ca_23746_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_20250_v3 Ca_LG6_v3 - View
Corylus avellana Haze_08941 Similar to PUX8: Plant UBX domain-containing protein 8 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g14060 Ubiquitin-like superfamily protein chr8 - View
Citrus clementina Ciclev10019779m.g scaffold_3 + View
Citrus clementina Ciclev10019482m.g scaffold_3 - View
Ceratophyllum demersum CDE04G2022 2 - View
Carpinus fangiana Cfa012110 Cfa05 - View
Cardamine hirsuta CARHR254610 UBX domain-containing protein Chr8 - View
Cardamine hirsuta CARHR230100 UBX domain-containing protein Chr7 - View
Carya illinoinensis CiPaw.12G097600 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Chr12 + View
Carya illinoinensis CiPaw.01G054900 PTHR23322:SF3 - PROTEIN SAY1 Chr01 - View
Carya illinoinensis CiPaw.11G140600 PTHR23322:SF3 - PROTEIN SAY1 Chr11 + View
Chenopodium quinoa AUR62017287 PUX8: Plant UBX domain-containing protein 8 C_Quinoa_Scaffold_3489 + View
Chenopodium quinoa AUR62010645 PUX8: Plant UBX domain-containing protein 8 C_Quinoa_Scaffold_1280 + View
Capsella rubella Carub.0002s0187 KOG2689 - Predicted ubiquitin regulatory protein scaffold_2 + View
Capsella rubella Carub.0007s1823 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 scaffold_7 + View
Capsella rubella Carub.0006s3083 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 scaffold_6 + View
Daucus carota DCAR_004672 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_006758 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37683 GWHABJS00000017 + View
Davidia involucrata Dinv39004 GWHABJS00000003 + View
Durio zibethinus Duzib138G0581 NW_019167893.1 - View
Durio zibethinus Duzib068G1440 NW_019167838.1 - View
Durio zibethinus Duzib205G1004 NW_019168381.1 - View
Erigeron canadensis ECA240G2117 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.E00535 Chr05 - View
Erythranthe guttata Migut.E01291 scaffold_5 + View
Erythranthe guttata Migut.A00926 scaffold_1 - View
Eutrema salsugineum Thhalv10028549m.g PTHR23322:SF3 - PROTEIN SAY1 scaffold_3 - View
Fragaria x ananassa FAN06G1792 K18726 - FAS-associated factor 2 (FAF2, UBXD8) Fvb7-2 - View
Fragaria x ananassa FAN01G2025 K18726 - FAS-associated factor 2 (FAF2, UBXD8) Fvb7-4 + View
Fragaria x ananassa FAN18G2326 PTHR23322:SF3 - PROTEIN SAY1 Fvb5-1 - View
Fragaria x ananassa FAN13G0317 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Fvb5-2 - View
Fragaria x ananassa FAN06G1900 K18726 - FAS-associated factor 2 (FAF2, UBXD8) Fvb7-2 - View
Fragaria x ananassa FAN08G3344 PTHR23322:SF3 - PROTEIN SAY1 Fvb5-3 + View
Fragaria x ananassa FAN04G2772 PTHR23322:SF3 - PROTEIN SAY1 Fvb5-4 - View
Fragaria vesca FvH4_5g01560 PTHR23322:SF3 - PROTEIN SAY1 Fvb5 - View
Gossypium hirsutum Gohir.D09G187200 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 D09 + View
Gossypium hirsutum Gohir.A12G225400 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 A12 - View
Gossypium hirsutum Gohir.D12G228000 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 D12 - View
Gossypium hirsutum Gohir.A09G193001 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 A09 + View
Glycine max Glyma.17G131100 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Gm17 + View
Glycine max Glyma.05G049200 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Gm05 + View
Glycine max Glyma.07G077200 K18726 - FAS-associated factor 2 (FAF2, UBXD8) Gm07 + View
Gossypium raimondii Gorai.008G244000 Chr08 - View
Gossypium raimondii Gorai.006G210000 Chr06 + View
Helianthus annuus HanXRQChr17g0533751 Putative ubiquitin-related domain HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0514F.1_g170040 Hma1.2p1_0514F.1 + View
Hydrangea macrophylla Hma1.2p1_0371F.1_g138100 Hma1.2p1_0371F.1 + View
Lupinus albus Lalb_Chr16g0389741 PTHR23322:SF3 - PROTEIN SAY1 Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0321151 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Lalb_Chr09 + View
Lupinus albus Lalb_Chr05g0225031 PTHR23322:SF3 - PROTEIN SAY1 Lalb_Chr05 + View
Lotus japonicus Lj3g0008628 K18726 - FAS-associated factor 2 (FAF2, UBXD8) chr3 + View
Lotus japonicus Lj2g0016961 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 chr2 + View
Lonicera japonica Lj8A238T60 GWHAAZE00000008 + View
Lonicera japonica Lj2A193T55 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_87540 PTHR23322:SF3 - PROTEIN SAY1 Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_3_5420 PTHR23322:SF3 - PROTEIN SAY1 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI12_g29747_MAGBIO AED:0.07 Chr12 - View
Magnolia biondii MBI04_g00304_MAGBIO AED:0.12 Chr04 - View
Malus domestica MD06G1073600 Ubiquitin-like superfamily protein Chr06 - View
Malus domestica MD04G1066700 Ubiquitin-like superfamily protein Chr04 + View
Manihot esculenta Manes.01G066200 Chromosome01 + View
Medicago truncatula Medtr4g102810 Ara4-interacting protein chr4 - View
Medicago truncatula Medtr8g432670 Ara4-interacting protein chr8 + View
Nelumbo nucifera Nn6g34230 chr6 + View
Nelumbo nucifera Nn1g01376 chr1 - View
Nicotiana tabacum Nitab4.5_0002234g0060 UBA-like, UBX Nitab4.5_0002234 + View
Olea europaea Oeu048784.1 chr13 - View
Olea europaea Oeu031597.1 chr22 - View
Oryza sativa ssp. japonica Os09g0525600 UBX domain containing protein. Similar to UBX domain-containing protein. chr09 - View
Oryza sativa ssp. japonica Os08g0546400 UBX domain containing protein. chr08 - View
Petunia axillaris Peaxi162Scf00714g00057 Ubiquitin-like superfamily protein, putative isoform 2 Peaxi162Scf00714 + View
Punica granatum PGR042G2076 NC_045130.1 + View
Prunus persica Prupe.2G156600 K18726 - FAS-associated factor 2 (FAF2, UBXD8) Pp02 - View
Prunus persica Prupe.5G091800 PTHR23322:SF3 - PROTEIN SAY1 Pp05 - View
Pisum sativum Psat4g066960 UBX domain chr4LG4 + View
Papaver somniferum PSO478G0346 NC_039361.1 - View
Populus trichocarpa Potri.001G109500 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Chr01 - View
Populus trichocarpa Potri.003G122300 PTHR23322//PTHR23322:SF3 - FAS-ASSOCIATED PROTEIN // PROTEIN SAY1 Chr03 + View
Populus trichocarpa Potri.014G075600 PF00789//PF02809//PF14555 - UBX domain (UBX) // Ubiquitin interaction motif (UIM) // UBA-like domain (UBA_4) Chr14 + View
Phaseolus vulgaris Phvul.003G212000 PTHR23322:SF3 - PROTEIN SAY1 Chr03 + View
Quercus lobata QL12p017410 12 - View
Quercus lobata QL08p050362 8 + View
Rosa chinensis RcHm_v2.0_Chr7g0199121 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0094100 chr07 + View
Striga asiatica SGA_v2.0_scaffold144G35971 scaffold144 + View
Salvia bowleyana SalBow6G0746 GWHASIU00000002 + View
Salix brachista Sabra03G0086200 GWHAAZH00000003 + View
Salix brachista Sabra14G0056200 GWHAAZH00000014 - View
Simmondsia chinensis Sc22g0000260 GWHAASQ00000022 - View
Simmondsia chinensis Sc01g0008750 GWHAASQ00000001 + View
Sechium edule Sed0021874 LG03 - View
Solanum lycopersicum Solyc08g080410.3 Plant ubx domain-containing protein 8 (AHRD V3.3 *** A0A1J6KG92_NICAT) SL4.0ch08 - View
Schrenkiella parvula Sp6g05690 PTHR23322:SF3 - PROTEIN SAY1 ch6-1 - View
Solanum pennellii Sopen08g028740 Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. | SAY1 | INVOLVED IN: vesicle-mediated transport | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: UBX , Ubiquitin interacting motif , UBA-like | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400003048 Ara4-interacting protein ST4.03ch08 - View
Selenicereus undatus Hund11524 Scaffold_10417 + View
Trochodendron aralioides TAR375G0217 group15 - View
Trochodendron aralioides TAR636G2592 group1 + View
Trochodendron aralioides TAR629G3349 group0 + View
Theobroma cacao Thecc.03G272100 Ubiquitin-like superfamily protein Chromosome_3 - View
Theobroma cacao Thecc.01G367100 UBX domain-containing protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104806375 plant UBX domain-containing protein 8 NW_010962392.1 - View
Tarenaya hassleriana THA.LOC104814310 plant UBX domain-containing protein 8 isoform X1 NW_010960187.1 - View
Trifolium pratense TPR.G19228 Tp57577_TGAC_v2_scaf_345 - View
Tripterygium wilfordii TWI81G0934 NC_052251.1 - View
Tripterygium wilfordii TWI60G1702 NC_052246.1 + View
Utricularia gibba unitig_26.g9695 unitig_26 - View
Vigna mungo VMungo1215G1054 CM024074.1 - View
Vigna mungo VMungo0331G0411 CM024078.1 + View
Vitis vinifera GSVIVG01019815001 chr2 - View
Zea mays Zm00001eb198600 Zm00001e024267 4 + View
Zea mays Zm00001eb103170 Zm00001e010201 Plant UBX domain-containing protein 8 2 - View