Gene: Sopen08g028740

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g028740
  • Transcript Identifier Sopen08g028740.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 68224946-68231246 : negative

Gene Family Information

  • ID HOM05D002884
  • #Genes/#Species 240/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g028740.1

Descriptions

  • Description Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. | SAY1 | INVOLVED IN: vesicle-mediated transport | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: UBX , Ubiquitin interacting motif , UBA-like | BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
ISO
PLAZA Integrative Orthologyvesicle-mediated transport AT4G11740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G11740
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G11740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR001012 UBX domain
IPR003903 Ubiquitin interacting motif
IPR009060 UBA-like superfamily
Mapman id Description
19.3.3.1.4 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (PUX7/8/9/13)