Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0036319 hypothetical protein VITISV_006556 [Vitis vinifera] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G19430 LG-5 - View
Aethionema arabicum Aa31LG10G10920 LG-10 + View
Acer truncatum Atru.chr12.46 chr12 + View
Actinidia chinensis Actinidia13941 Lachesis_group21 + View
Actinidia chinensis Actinidia23232 Lachesis_group20 - View
Arabidopsis lyrata AL4G37850 scaffold_4 + View
Arabidopsis lyrata AL5G37260 scaffold_5 + View
Avicennia marina MSTRG.8335 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.8960 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.10g036580 Zinc finger CCCH domain-containing protein 29 (AtC3H29) (AtSZF2) AmaHy_arrow1_Scaffold_10 + View
Amaranthus hybridus Ah.16g103600 AmaHy_arrow1_Scaffold_16 - View
Aquilegia oxysepala Aqoxy4G02540 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SFTJ5P PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GX00WG PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT2G40140 zinc finger (CCCH-type) family protein CZF1%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 (TAIR:AT3G55980.1)%3B Has 1196 Blast hits to 1143 proteins in 183 species: Archae - 4%3B Bacteria - 47%3B Metazoa - 401%3B Fungi - 61%3B Plants - 441%3B Viruses - 2%3B Other Eukaryotes - 240 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G55980 salt-inducible zinc finger 1 salt-inducible zinc finger 1 (SZF1)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%2C Ankyrin repeat-containing domain (InterPro:IPR020683)%2C Ankyrin repeat (InterPro:IPR002110)%3B BEST Arabidopsis thaliana protein match is: zinc finger (CCCH-type) family protein (TAIR:AT2G40140.2)%3B Has 1623 Blast hits to 1414 proteins in 181 species: Archae - 2%3B Bacteria - 49%3B Metazoa - 777%3B Fungi - 32%3B Plants - 465%3B Viruses - 2%3B Other Eukaryotes - 296 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g03567 ChrB01 - View
Brassica carinata BcaC01g05427 ChrC01 - View
Brassica carinata BcaB01g00044 ChrB01 - View
Brassica carinata BcaC07g39917 ChrC07 + View
Brassica napus A09p48930 A09 + View
Brassica napus C08p31300 C08 + View
Brassica oleracea BolC4t22348H C4 - View
Brassica oleracea BolC8t50751H C8 + View
Brassica oleracea BolC3t15062H C3 + View
Brassica rapa BraA09t40348Z A09 + View
Beta vulgaris EL10Ac2g04842 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr2_EL10_PGA_scaffold6 + View
Cicer arietinum L. Ca_05969_v3 Ca_LG2_v3 + View
Corylus avellana Haze_17235 Similar to At2g40140: Zinc finger CCCH domain-containing protein 29 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g06420 Zinc finger CCCH domain-containing protein 29 chr2 - View
Coffea canephora Cc01_g14310 Zinc finger CCCH domain-containing protein 66 chr1 + View
Citrus clementina Ciclev10030920m.g scaffold_4 + View
Citrus clementina Ciclev10027883m.g scaffold_8 + View
Carpinus fangiana Cfa011707 Cfa04 + View
Carpinus fangiana Cfa001310 Cfa01 - View
Cardamine hirsuta CARHR166060 Zinc finger CCCH domain-containing protein 47 Chr5 + View
Cardamine hirsuta CARHR135150 Zinc finger CCCH domain-containing protein Chr4 + View
Carya illinoinensis CiPaw.01G299700 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr01 + View
Carya illinoinensis CiPaw.02G192900 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr02 + View
Carya illinoinensis CiPaw.13G076500 PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Chr13 - View
Citrullus lanatus ClCG07G004270 Zinc finger CCCH domain-containing protein 29-like protein CG_Chr07 + View
Cucumis melo MELO3C026788.2 Zinc finger CCCH domain-containing protein 29-like protein chr10 + View
Carica papaya Cpa.g.sc112.5 supercontig_112 - View
Chenopodium quinoa AUR62022892 At3g55980: Zinc finger CCCH domain-containing protein 47 C_Quinoa_Scaffold_3378 + View
Chenopodium quinoa AUR62012259 At2g40140: Zinc finger CCCH domain-containing protein 29 C_Quinoa_Scaffold_1995 + View
Capsella rubella Carub.0004s2235 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED scaffold_4 + View
Capsella rubella Carub.0005s2272 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_5G010210 Zinc finger CCCH domain-containing protein chr5 + View
Daucus carota DCAR_024822 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_011819 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv10615 GWHABJS00000009 + View
Davidia involucrata Dinv18004 GWHABJS00000004 + View
Davidia involucrata Dinv28650 GWHABJS00000010 + View
Durio zibethinus Duzib114G0884 NW_019167926.1 - View
Durio zibethinus Duzib106G1378 NW_019168492.1 - View
Durio zibethinus Duzib128G1275 NW_019168481.1 - View
Durio zibethinus Duzib168G1949 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168159.1 - View
Erigeron canadensis ECA238G3946 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G3343 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA233G1342 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00202 Chr10 - View
Eucalyptus grandis Eucgr.G03067 Chr07 + View
Erythranthe guttata Migut.F00690 scaffold_6 + View
Eutrema salsugineum Thhalv10005860m.g PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED scaffold_19 - View
Eutrema salsugineum Thhalv10016372m.g PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED scaffold_10 + View
Fragaria x ananassa FAN01G2705 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Fvb7-4 - View
Fragaria x ananassa FAN03G3128 PTHR14493//PTHR14493:SF51 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Fvb7-3 - View
Fragaria x ananassa FAN06G0589 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Fvb7-2 + View
Fragaria vesca FvH4_7g24560 PTHR14493//PTHR14493:SF51 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Fvb7 + View
Gossypium hirsutum Gohir.D10G249100 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED D10 + View
Gossypium hirsutum Gohir.A13G014900 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A13 - View
Gossypium hirsutum Gohir.A10G237400 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A10 + View
Gossypium hirsutum Gohir.D06G168400 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED D06 - View
Gossypium hirsutum Gohir.A06G162900 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A06 - View
Gossypium hirsutum Gohir.D13G016100 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED D13 - View
Glycine max Glyma.18G062200 PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Gm18 - View
Glycine max Glyma.02G227000 PF00642//PF13637 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (many copies) (Ank_4) Gm02 + View
Gossypium raimondii Gorai.011G289400 Chr11 + View
Gossypium raimondii Gorai.010G196500 Chr10 - View
Gossypium raimondii Gorai.013G017600 Chr13 - View
Helianthus annuus HanXRQChr14g0459621 Putative zinc finger, CCCH-type; Ankyrin repeat-containing domain HanXRQChr14 - View
Helianthus annuus HanXRQChr15g0496321 Probable zinc finger CCCH domain-containing protein 33 HanXRQChr15 + View
Helianthus annuus HanXRQChr07g0202901 Putative zinc finger, CCCH-type; Ankyrin repeat-containing domain HanXRQChr07 + View
Hydrangea macrophylla Hma1.2p1_0281F.1_g113190 Hma1.2p1_0281F.1 + View
Lupinus albus Lalb_Chr17g0346821 PTHR14493//PTHR14493:SF51 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Lalb_Chr17 + View
Lotus japonicus LjContig00357g0002976 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Contig00357 - View
Lonicera japonica Lj8C66T12 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_8_11721 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Lsat_1_v8_lg_8 - View
Lactuca sativa Lsat_1_v5_gn_9_61640 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_2_124621 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Lsat_1_v8_lg_2 + View
Malus domestica MD07G1222900 zinc finger (CCCH-type) family protein Chr07 + View
Malus domestica MD01G1154000 zinc finger (CCCH-type) family protein Chr01 + View
Malus domestica MD03G1068400 zinc finger (CCCH-type) family protein Chr03 - View
Manihot esculenta Manes.01G160800 Chromosome01 - View
Manihot esculenta Manes.07G130600 Chromosome07 + View
Manihot esculenta Manes.10G011700 Chromosome10 - View
Medicago truncatula Medtr5g082830 ARM repeat CCCH-type zinc finger protein chr5 + View
Medicago truncatula Medtr3g070880 ARM repeat CCCH-type zinc finger protein chr3 + View
Nelumbo nucifera Nn2g11532 chr2 + View
Nelumbo nucifera Nn2g13145 chr2 + View
Olea europaea Oeu004696.1 chr11 - View
Punica granatum PGR044G0053 NC_045134.1 + View
Punica granatum PGR142G4052 NC_045128.1 + View
Prunus persica Prupe.6G056300 PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Pp06 - View
Prunus persica Prupe.2G251000 Pp02 + View
Pisum sativum Psat2g031760 Ankyrin repeats (3 copies) chr2LG1 + View
Papaver somniferum PSO384G2129 NC_039368.1 + View
Populus trichocarpa Potri.001G252600 PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Chr01 + View
Populus trichocarpa Potri.010G187900 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr10 - View
Populus trichocarpa Potri.008G069400 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr08 + View
Phaseolus vulgaris Phvul.008G223400 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED Chr08 - View
Quercus lobata QL01p038570 1 + View
Rosa chinensis RcHm_v2.0_Chr1g0370401 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim09G0177600 chr09 + View
Rhododendron simsii Rhsim13G0068400 chr13 - View
Striga asiatica SGA_v2.0_scaffold60G21011 scaffold60 + View
Salvia bowleyana SalBow6G4145 GWHASIU00000002 + View
Salix brachista Sabra08G0051000 GWHAAZH00000008 + View
Salix brachista Sabra10G0144700 GWHAAZH00000010 - View
Salix brachista Sabra09G0034200 GWHAAZH00000009 + View
Simmondsia chinensis Sc10g0002400 GWHAASQ00000010 + View
Simmondsia chinensis Sc21g0006430 GWHAASQ00000021 + View
Sechium edule Sed0026304 LG07 + View
Sechium edule Sed0019650 LG04 + View
Solanum lycopersicum Solyc05g052550.1 Zinc finger CCCH domain-containing protein 47 (AHRD V3.3 *-* A0A1U8GQ71_CAPAN) SL4.0ch05 - View
Schrenkiella parvula Sp5g06550 PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 ch5-1 - View
Schrenkiella parvula Sp4g22490 PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED ch4-6 + View
Solanum pennellii Sopen05g031090 CZF1 | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Ankyrin repeat-containing domain , Ankyrin repeat | BEST Arabidopsis thaliana protein match is: salt-inducible zinc finger 1 Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400027176 Transcription factor ST4.03ch05 - View
Trochodendron aralioides TAR623G1056 group7 + View
Trochodendron aralioides TAR633G0915 group2 + View
Trochodendron aralioides TAR636G1809 group1 - View
Theobroma cacao Thecc.10G015300 Chromosome_10 - View
Tarenaya hassleriana THA.LOC104810104 zinc finger CCCH domain-containing protein 47-like NW_010965122.1 + View
Tarenaya hassleriana THA.LOC104824320 zinc finger CCCH domain-containing protein 29-like NW_010966881.1 + View
Trifolium pratense TPR.G38447 Tp57577_TGAC_v2_LG5 - View
Trifolium pratense TPR.G11198 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI79G0792 NC_052238.1 - View
Tripterygium wilfordii TWI31G0076 NC_052233.1 - View
Tripterygium wilfordii TWI73G0092 NC_052232.1 + View
Tripterygium wilfordii TWI09G0595 NC_052245.1 - View
Tripterygium wilfordii TWI53G1426 NC_052244.1 - View
Vaccinium macrocarpon vmacro02954 Similar to At5g58620: Zinc finger CCCH domain-containing protein 66 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro10038 Similar to At2g40140: Zinc finger CCCH domain-containing protein 29 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G2480 CM024073.1 - View
Vitis vinifera GSVIVG01032807001 chr13 + View
Vitis vinifera GSVIVG01024728001 chr6 + View