Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G9870 LG-2 + View
Aethionema arabicum Aa31LG11G14810 LG-11 - View
Acer truncatum Atru.chr6.2326 chr6 - View
Actinidia chinensis Actinidia35754 Lachesis_group21 + View
Arabidopsis lyrata AL2G29870 scaffold_2 - View
Avicennia marina MSTRG.7906 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.585 ScioBoG_102831_HRSCAF_103044 + View
Aquilegia oxysepala Aqoxy3G01106 CHR03 - View
Aquilegia oxysepala Aqoxy3G02906 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LIXN1K K01184 - polygalacturonase (E3.2.1.15) arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.41UHLG K01184 - polygalacturonase (E3.2.1.15) arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT1G60590 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G10640.1)%3B Has 4525 Blast hits to 4468 proteins in 546 species: Archae - 6%3B Bacteria - 1298%3B Metazoa - 151%3B Fungi - 1295%3B Plants - 1596%3B Viruses - 3%3B Other Eukaryotes - 176 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G70500 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G23460.1)%3B Has 4030 Blast hits to 4010 proteins in 486 species: Archae - 4%3B Bacteria - 1128%3B Metazoa - 14%3B Fungi - 1268%3B Plants - 1483%3B Viruses - 0%3B Other Eukaryotes - 133 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G14650 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: F mature embryo stage%2C LP.02 two leaves visible%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT1G60590.1)%3B Has 4562 Blast hits to 4542 proteins in 626 species: Archae - 6%3B Bacteria - 1470%3B Metazoa - 14%3B Fungi - 1443%3B Plants - 1493%3B Viruses - 0%3B Other Eukaryotes - 136 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC05g26265 ChrC05 + View
Brassica carinata BcaC08g46493 ChrC08 - View
Brassica napus A10p24020 A10 - View
Brassica napus C06p44370 C06 - View
Brassica napus C09p62490 C09 - View
Brassica napus A09p41190 A09 - View
Brassica oleracea BolC9t59086H C9 - View
Brassica oleracea BolC6t39506H C6 - View
Brassica rapa BraA10t44465Z A10 - View
Cannabis sativa CANSAT64G0312 NC_044379.1 + View
Corylus avellana Haze_14695 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) 5 - View
Citrus clementina Ciclev10015111m.g scaffold_2 - View
Ceratophyllum demersum CDE07G1460 5 - View
Ceratophyllum demersum CDE04G1084 2 - View
Carpinus fangiana Cfa007408 Cfa03 + View
Cardamine hirsuta CARHR023890 Polygalacturonase Chr1 + View
Cardamine hirsuta CARHR063660 Polygalacturonase Chr2 - View
Cardamine hirsuta CARHR198670 Polygalacturonase Chr6 - View
Carya illinoinensis CiPaw.03G040200 K01184 - polygalacturonase (E3.2.1.15) Chr03 - View
Citrullus lanatus ClCG10G014070 Pectin lyase-like superfamily protein LENGTH=540 CG_Chr10 + View
Citrullus lanatus ClCG05G025420 Polygalacturonase CG_Chr05 - View
Cucumis melo MELO3C011987.2 Polygalacturonase chr10 - View
Cucumis melo MELO3C009970.2 polygalacturonase At1g48100 chr04 + View
Carica papaya Cpa.g.sc108.28 supercontig_108 - View
Capsella rubella Carub.0006s1282 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_6 + View
Capsella rubella Carub.0002s1718 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_3G042590 polygalacturonase At1g48100 chr3 - View
Daucus carota DCAR_011235 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_007081 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv33474 GWHABJS00000014 + View
Davidia involucrata Dinv15278 GWHABJS00000008 - View
Davidia involucrata Dinv35083 GWHABJS00000012 - View
Durio zibethinus Duzib147G1425 NW_019168470.1 - View
Durio zibethinus Duzib251G0331 NW_019167971.1 - View
Durio zibethinus Duzib248G1572 NW_019168048.1 + View
Erigeron canadensis ECA232G1529 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.B03312 Chr02 - View
Eucalyptus grandis Eucgr.I01777 Chr09 + View
Erythranthe guttata Migut.E00174 scaffold_5 - View
Erythranthe guttata Migut.H00099 scaffold_8 + View
Erythranthe guttata Migut.L01425 scaffold_12 - View
Eutrema salsugineum Thhalv10006630m.g PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_5 - View
Eutrema salsugineum Thhalv10019797m.g PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10013501m.g PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN scaffold_2 + View
Fragaria x ananassa FAN02G1976 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-4 - View
Fragaria x ananassa FAN14G2349 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-1 + View
Fragaria x ananassa FAN09G0992 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-2 + View
Fragaria x ananassa FAN05G1811 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb6-3 - View
Fragaria x ananassa FAN05G5021 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6-3 + View
Fragaria vesca FvH4_6g50960 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Fvb6 - View
Gossypium hirsutum Gohir.D07G228400 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN D07 - View
Gossypium hirsutum Gohir.A07G221700 K01184 - polygalacturonase (E3.2.1.15) A07 - View
Gossypium hirsutum Gohir.D09G026266 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED D09 + View
Gossypium hirsutum Gohir.D02G161250 PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN D02 + View
Gossypium hirsutum Gohir.A03G138250 PTHR24015:SF705 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN A03 + View
Glycine max Glyma.19G006200 K01184 - polygalacturonase (E3.2.1.15) Gm19 + View
Glycine max Glyma.18G139802 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Gm18 + View
Glycine max Glyma.05G005800 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Gm05 + View
Glycine max Glyma.08G285350 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Gm08 + View
Gossypium raimondii Gorai.001G263400 Chr01 - View
Gossypium raimondii Gorai.005G181300 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0993F.1_g245310 Hma1.2p1_0993F.1 + View
Lupinus albus Lalb_Chr02g0160451 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Lalb_Chr02 - View
Lotus japonicus Lj2g0006798 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN chr2 - View
Lotus japonicus Lj4g0003274 PTHR24015//PTHR24015:SF705 - FAMILY NOT NAMED // PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN chr4 + View
Lonicera japonica Lj7A594G55 GWHAAZE00000007 - View
Lonicera japonica Lj3C1054T19 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_4_183001 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Lsat_1_v8_lg_4 - View
Malus domestica MD13G1094100 Pectin lyase-like superfamily protein Chr13 - View
Malus domestica MD09G1030100 Pectin lyase-like superfamily protein Chr09 + View
Malus domestica MD17G1032000 Pectin lyase-like superfamily protein Chr17 + View
Manihot esculenta Manes.15G149400 Chromosome15 + View
Manihot esculenta Manes.17G113400 Chromosome17 - View
Medicago truncatula Medtr6g005630 polygalacturonase chr6 + View
Nelumbo nucifera Nn3g16838 chr3 + View
Nelumbo nucifera Nn4g22738 chr4 + View
Punica granatum PGR142G2289 NC_045128.1 - View
Punica granatum PGR102G3127 NC_045129.1 + View
Punica granatum PGR119G1190 NC_045132.1 - View
Punica granatum PGR083G0987 NC_045133.1 - View
Prunus persica Prupe.3G287200 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Pp03 - View
Papaver somniferum PSO017G0856 NC_039362.1 - View
Papaver somniferum PSO832G1648 NC_039367.1 + View
Papaver somniferum PSO478G2887 NC_039361.1 - View
Populus trichocarpa Potri.001G346800 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Chr01 - View
Phaseolus vulgaris Phvul.004G011800 PTHR31375:SF34 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN Chr04 + View
Phaseolus vulgaris Phvul.003G061600 PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Chr03 - View
Quercus lobata QL02p075820 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0443631 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr4g0426531 RcHm_v2.0_Chr4 + View
Rosa chinensis RcHm_v2.0_Chr2g0172361 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim12G0043800 chr12 + View
Rhododendron simsii Rhsim08G0053100 chr08 + View
Striga asiatica SGA_v2.0_scaffold481G52334 scaffold481 + View
Salvia bowleyana SalBow8G0085 GWHASIU00000004 - View
Salvia bowleyana SalBow1G6474 GWHASIU00000001 + View
Simmondsia chinensis Sc04g0009250 GWHAASQ00000004 - View
Sechium edule Sed0022822 LG06 - View
Sechium edule Sed0013488 LG06 + View
Schrenkiella parvula Sp6g29390 PTHR31375//PTHR31375:SF34 - FAMILY NOT NAMED // PECTIN LYASE-LIKE SUPERFAMILY PROTEIN ch6-6 - View
Schrenkiella parvula Sp2g04160 PTHR31375//PTHR31375:SF46 - FAMILY NOT NAMED // PECTIN LYASE-LIKE PROTEIN ch2-2 + View
Schrenkiella parvula Sp1g20890 PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED ch1-1 + View
Selenicereus undatus Hund25361 Scaffold_3410 - View
Trochodendron aralioides TAR629G3277 group0 - View
Theobroma cacao Thecc.04G012200 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104822395 polygalacturonase At1g48100 isoform X1 NW_010966665.1 - View
Trifolium pratense TPR.G8716 Tp57577_TGAC_v2_scaf_515 + View
Tripterygium wilfordii TWI56G1430 NC_052242.1 - View
Tripterygium wilfordii TWI18G0738 NC_052241.1 - View
Vaccinium macrocarpon vmacro18260 Similar to At1g48100: Polygalacturonase At1g48100 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16230 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0336 CM024077.1 + View
Vitis vinifera GSVIVG01032447001 chr14 + View