Gene: THA.LOC104822395

General Information

Structural Information

  • Species Tarenaya hassleriana
  • Gene Identifier THA.LOC104822395
  • Transcript Identifier THA.XM_010553607.2
  • Gene Type Coding gene
  • Location NW_010966665.1 : 941049-943276 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • GeneID 104822395
  • RefSeq XP_010551909.1
  • RefSeq XM_010553607.2
  • tid rna29522
  • id gene19221
  • gene LOC104822395

Descriptions

  • Description polygalacturonase At1g48100 isoform X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT5G14650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G14650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012334 Pectin lyase fold
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase