Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0031291 PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Vitis vinifera] Chr12 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G630 LG-6 + View
Aethionema arabicum Aa31LG9G6150 LG-9 + View
Acer truncatum Atru.chr6.1699 chr6 - View
Actinidia chinensis Actinidia14804 Lachesis_group14 - View
Actinidia chinensis Actinidia09191 Lachesis_group13 - View
Arabidopsis lyrata AL8G11610 scaffold_8 + View
Arabidopsis lyrata AL7G36630 scaffold_7 - View
Avicennia marina MSTRG.12161 ScioBoG_17730_HRSCAF_17811 + View
Amaranthus hybridus Ah.12g055090 Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.4.19.12) (Deubiquitinating enzyme 20) (AtUBP20) (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy3G02342 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0EZ7EA PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A7Q6YJ PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G17895 ubiquitin-specific protease 20 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 20 (UBP20)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 (TAIR:AT5G46740.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G46740 ubiquitin-specific protease 21 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 21 (UBP21)%3B FUNCTIONS IN: ubiquitin-specific protease activity%2C ubiquitin thiolesterase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 20 (TAIR:AT4G17895.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g34352 ChrC06 + View
Brassica carinata BcaC06g31452 ChrC06 + View
Brassica napus A08p13400 A08 + View
Brassica napus C07p49220 C07 + View
Brassica napus C07p30040 C07 - View
Brassica napus A03p50840 A03 + View
Brassica napus A06p45710 A06 + View
Brassica oleracea BolC7t43544H C7 - View
Brassica oleracea BolC7t45432H C7 + View
Brassica rapa BraA08t33319Z A08 + View
Brassica rapa BraA06t27440Z A06 + View
Beta vulgaris EL10Ac5g12115 PTHR24006:SF470 - PROTEIN Y71A12B.15 Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G298.10 PGAv.1.6.scaffold298 + View
Cannabis sativa CANSAT21G0911 NC_044374.1 + View
Cicer arietinum L. Ca_22649_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_06082_v3 Ca_LG2_v3 + View
Corylus avellana Haze_08220 Similar to UBP20: Ubiquitin carboxyl-terminal hydrolase 20 (Arabidopsis thaliana OX%3D3702) 4 - View
Coffea canephora Cc08_g02820 Uncharacterized protein (Fragment) chr8 + View
Citrus clementina Ciclev10013784m.g scaffold_6 + View
Ceratophyllum demersum CDE02G0013 1 + View
Carpinus fangiana Cfa012444 Cfa05 + View
Cardamine hirsuta CARHR224620 Ubiquitin carboxyl-terminal hydrolase Chr7 + View
Cardamine hirsuta CARHR174760 Ubiquitin carboxyl-terminal hydrolase Chr6 + View
Carya illinoinensis CiPaw.11G093800 PTHR24006:SF470 - PROTEIN Y71A12B.15 Chr11 + View
Citrullus lanatus ClCG10G001570 Ubiquitin carboxyl-terminal hydrolase CG_Chr10 - View
Cucumis melo MELO3C013849.2 ubiquitin carboxyl-terminal hydrolase 20-like chr06 - View
Chenopodium quinoa AUR62007296 UBP20: Ubiquitin carboxyl-terminal hydrolase 20 C_Quinoa_Scaffold_1971 + View
Chenopodium quinoa AUR62018709 UBP20: Ubiquitin carboxyl-terminal hydrolase 20 C_Quinoa_Scaffold_1817 - View
Capsella rubella Carub.0008s0118 PTHR24006:SF524 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21 scaffold_8 + View
Cucumis sativus L. CsaV3_3G001680 ubiquitin carboxyl-terminal hydrolase 20-like chr3 - View
Daucus carota DCAR_008266 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_005635 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv25218 GWHABJS00000017 + View
Durio zibethinus Duzib068G0882 NW_019167838.1 - View
Durio zibethinus Duzib205G0116 NW_019168381.1 - View
Erigeron canadensis ECA246G4772 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.D02203 Chr04 + View
Eutrema salsugineum Thhalv10000790m.g PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE scaffold_20 - View
Eutrema salsugineum Thhalv10024586m.g PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE scaffold_1 - View
Fragaria x ananassa FAN08G1798 PTHR24006:SF470 - PROTEIN Y71A12B.15 Fvb5-3 - View
Fragaria x ananassa FAN04G0675 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Fvb5-4 + View
Fragaria x ananassa FAN13G0520 PTHR24006:SF470 - PROTEIN Y71A12B.15 Fvb5-2 - View
Fragaria x ananassa FAN18G2803 PTHR24006:SF470 - PROTEIN Y71A12B.15 Fvb5-1 + View
Fragaria vesca FvH4_5g22140 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Fvb5 + View
Gossypium hirsutum Gohir.D11G029400 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 D11 + View
Gossypium hirsutum Gohir.A03G000400 PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE A03 - View
Gossypium hirsutum Gohir.A11G030700 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 A11 + View
Gossypium hirsutum Gohir.D03G171800 PTHR24006//PTHR24006:SF451 - FAMILY NOT NAMED // UBIQUITIN CARBOXYL-TERMINAL HYDROLASE D03 + View
Glycine max Glyma.09G204600 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Gm09 + View
Glycine max Glyma.01G018300 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Gm01 - View
Gossypium raimondii Gorai.007G032000 Chr07 + View
Gossypium raimondii Gorai.003G182400 Chr03 + View
Helianthus annuus HanXRQChr06g0167511 Putative ubiquitin specific protease domain HanXRQChr06 + View
Lupinus albus Lalb_Chr09g0325631 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Lalb_Chr09 - View
Lupinus albus Lalb_Chr05g0216041 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0381331 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Lalb_Chr16 - View
Lotus japonicus Lj2g0004513 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 chr2 - View
Lotus japonicus Lj4g0000907 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 chr4 + View
Lactuca sativa Lsat_1_v5_gn_3_17880 Lsat_1_v8_lg_3 + View
Magnolia biondii MBI04_g23596_MAGBIO AED:0.08 Chr04 + View
Malus domestica MD16G1273900 ubiquitin-specific protease 21 Chr16 - View
Malus domestica MD06G1034700 ubiquitin-specific protease 21 Chr06 + View
Manihot esculenta Manes.17G010600 Chromosome17 - View
Medicago truncatula Medtr5g430360 ubiquitin carboxyl-terminal hydrolase-like protein chr5 - View
Nelumbo nucifera Nn1g08036 chr1 + View
Nicotiana tabacum Nitab4.5_0000804g0190 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site, Ubiquitin carboxyl-terminal hydrolases family 2 Nitab4.5_0000804 + View
Oryza sativa ssp. japonica Os02g0693400 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 family protein. chr02 + View
Petunia axillaris Peaxi162Scf00045g00007 Ubiquitin carboxyl-terminal hydrolase 20 Peaxi162Scf00045 + View
Petunia axillaris Peaxi162Scf00460g00014 Ubiquitin carboxyl-terminal hydrolase 20 Peaxi162Scf00460 - View
Punica granatum PGR031G0806 NC_045127.1 + View
Prunus persica Prupe.5G035200 PTHR24006:SF470 - PROTEIN Y71A12B.15 Pp05 - View
Papaver somniferum PSO063G2316 NC_039364.1 - View
Papaver somniferum PSO782G0103 NC_039365.1 + View
Populus trichocarpa Potri.003G092400 KOG1870//KOG1871//KOG1873 - Ubiquitin C-terminal hydrolase // Ubiquitin-specific protease // Ubiquitin-specific protease Chr03 + View
Populus trichocarpa Potri.001G142000 PTHR24006//PTHR24006:SF470 - FAMILY NOT NAMED // PROTEIN Y71A12B.15 Chr01 - View
Phaseolus vulgaris Phvul.002G141300 Chr02 - View
Quercus lobata QL12p005097 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0209791 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0127600 chr07 + View
Rhododendron simsii Rhsim11G0015700 chr11 + View
Striga asiatica SGA_v2.0_scaffold198G41098 scaffold198 - View
Salix brachista Sabra01G0110400 GWHAAZH00000001 - View
Salix brachista Sabra03G0061800 GWHAAZH00000003 + View
Simmondsia chinensis Sc07g0008680 GWHAASQ00000007 - View
Sechium edule Sed0017947 LG04 + View
Solanum lycopersicum Solyc08g005080.2 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *-* A0A2G2XLB4_CAPBA) SL4.0ch08 + View
Solanum lycopersicum Solyc08g076910.3 Ubiquitin carboxyl-terminal hydrolase 21 (AHRD V3.3 *** A0A2G3AFL7_CAPAN) SL4.0ch08 - View
Schrenkiella parvula Sp7g16220 PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ch7-4 - View
Schrenkiella parvula Sp2g11550 PTHR24006:SF451 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ch2-4 - View
Solanum pennellii Sopen08g025480 Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 20 (UBP20) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 Spenn-ch08 - View
Solanum pennellii Sopen08g001100 Encodes a ubiquitin-specific protease. | ubiquitin-specific protease 20 (UBP20) | FUNCTIONS IN: ubiquitin-specific protease activity, ubiquitin thiolesterase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 | BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 21 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400017850 Ubiquitin carboxyl-terminal hydrolase ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400017516 Ubiquitin carboxyl-terminal hydrolase ST4.03ch08 - View
Selenicereus undatus Hund14395 Scaffold_33677 - View
Trochodendron aralioides TAR375G1111 group15 + View
Theobroma cacao Thecc.03G227100 Ubiquitin-specific protease 20 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104827757 ubiquitin carboxyl-terminal hydrolase 21-like NW_010967966.1 - View
Tarenaya hassleriana THA.LOC104806712 ubiquitin carboxyl-terminal hydrolase 21-like NW_010962392.1 + View
Trifolium pratense TPR.G1020 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI15G0289 NC_052247.1 + View
Vaccinium macrocarpon vmacro14171 Similar to UBP21: Ubiquitin carboxyl-terminal hydrolase 21 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro00327 Similar to UBP21: Ubiquitin carboxyl-terminal hydrolase 21 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2088 CM024074.1 - View
Vitis vinifera GSVIVG01013154001 chr2 + View