Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.416 chr1 + View
Actinidia chinensis Actinidia03129 Lachesis_group3 - View
Actinidia chinensis Actinidia34133 Lachesis_group3 - View
Arabidopsis lyrata AL5G43710 scaffold_5 - View
Arabidopsis lyrata AL4G45170 scaffold_4 - View
Amaranthus hybridus Ah.13g068790 SKP1-like protein 21 (AtSK21) AmaHy_arrow1_Scaffold_13 + View
Aquilegia oxysepala Aqoxy7G00293 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8QB15U PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HWH8UE PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT2G45950 SKP1-like 20 SKP1-like 20 (SK20)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: SCF ubiquitin ligase complex%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C seedling growth%3B CONTAINS InterPro DOMAIN/s: SKP1 component%2C dimerisation (InterPro:IPR016072)%2C SKP1 component (InterPro:IPR001232)%2C BTB/POZ fold (InterPro:IPR011333)%3B BEST Arabidopsis thaliana protein match is: SKP1-like 21 (TAIR:AT3G61415.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT3G61415 SKP1-like 21 SKP1-like 21 (SK21)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: SCF ubiquitin ligase complex%3B EXPRESSED IN: stem%2C fruit%2C root%2C inflorescence%2C leaf%3B EXPRESSED DURING: seedling growth%3B CONTAINS InterPro DOMAIN/s: SKP1 component%2C dimerisation (InterPro:IPR016072)%2C SKP1 component (InterPro:IPR001232)%2C BTB/POZ fold (InterPro:IPR011333)%2C SKP1 component%2C POZ (InterPro:IPR016073)%3B BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1)%3B Has 1341 Blast hits to 1337 proteins in 268 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 524%3B Fungi - 168%3B Plants - 472%3B Viruses - 11%3B Other Eukaryotes - 154 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0680G050 AmTr_v1.0_scaffold00009 + View
Beta vulgaris EL10Ac3g05597 PTHR11165//PTHR11165:SF61 - SKP1 // SUBFAMILY NOT NAMED Chr3_EL10_PGA_scaffold7 + View
Corylus avellana Haze_00016 Similar to ASK21: SKP1-like protein 21 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g02670 SKP1-like protein 21 chr2 + View
Citrus clementina Ciclev10005270m.g scaffold_9 - View
Citrus clementina Ciclev10020595m.g scaffold_3 + View
Carpinus fangiana Cfa016264 Cfa06 - View
Cardamine hirsuta CARHR141220 SKP1-like 20 Chr4 - View
Carya illinoinensis CiPaw.05G263900 PTHR11165//PTHR11165:SF61//PTHR11165:SF62 - SKP1 // SUBFAMILY NOT NAMED // SKP1-LIKE PROTEIN 20-RELATED Chr05 + View
Carya illinoinensis CiPaw.02G031700 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED Chr02 - View
Cucumis melo MELO3C005828.2 SKP1-like protein 21 chr09 + View
Carica papaya Cpa.g.sc107.78 supercontig_107 - View
Chenopodium quinoa AUR62015948 ASK21: SKP1-like protein 21 C_Quinoa_Scaffold_3256 + View
Chenopodium quinoa AUR62021154 ASK21: SKP1-like protein 21 C_Quinoa_Scaffold_1783 + View
Capsella rubella Carub.0005s2811 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED scaffold_5 - View
Capsella rubella Carub.0004s2864 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED scaffold_4 - View
Daucus carota DCAR_006934 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_020262 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv35228 GWHABJS00000009 + View
Davidia involucrata Dinv43822 GWHABJS00000016 - View
Durio zibethinus Duzib133G0151 NW_019167938.1 - View
Durio zibethinus Duzib138G1934 NW_019167893.1 - View
Erigeron canadensis ECA238G3430 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.K00278 Chr11 - View
Erythranthe guttata Migut.B01761 scaffold_2 - View
Fragaria x ananassa FAN03G0533 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED Fvb7-3 + View
Fragaria x ananassa FAN10G2332 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Fvb7-1 - View
Fragaria x ananassa FAN03G1854 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Fvb7-3 + View
Fragaria x ananassa FAN10G0827 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED Fvb7-1 - View
Fragaria x ananassa FAN06G3716 PTHR11165//PTHR11165:SF61 - SKP1 // SUBFAMILY NOT NAMED Fvb7-2 - View
Fragaria x ananassa FAN01G1196 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Fvb7-4 + View
Fragaria x ananassa FAN06G4076 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED Fvb7-2 - View
Fragaria vesca FvH4_7g29890 PTHR11165//PTHR11165:SF61//PTHR11165:SF62 - SKP1 // SUBFAMILY NOT NAMED // SKP1-LIKE PROTEIN 20-RELATED Fvb7 - View
Gossypium hirsutum Gohir.A11G089200 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED A11 - View
Gossypium hirsutum Gohir.D11G093500 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED D11 - View
Glycine max Glyma.09G136000 PTHR11165//PTHR11165:SF62 - SKP1 // SKP1-LIKE PROTEIN 20-RELATED Gm09 + View
Glycine max Glyma.16G181500 PTHR11165//PTHR11165:SF61//PTHR11165:SF62 - SKP1 // SUBFAMILY NOT NAMED // SKP1-LIKE PROTEIN 20-RELATED Gm16 + View
Gossypium raimondii Gorai.007G099900 Chr07 - View
Helianthus annuus HanXRQChr14g0462351 Putative S-phase kinase-associated protein 1-like; S-phase kinase-associated protein 1 HanXRQChr14 - View
Lupinus albus Lalb_Chr19g0130721 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Lalb_Chr19 + View
Lonicera japonica Lj1A1001G59 GWHAAZE00000001 - View
Lonicera japonica Lj8C21G6 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_2_132761 Lsat_1_v8_lg_2 + View
Magnolia biondii MBI18_g29421_MAGBIO AED:0.34 Chr18 - View
Malus domestica MD07G1273900 SKP1-like 21 Chr07 - View
Malus domestica MD01G1205300 SKP1-like 21 Chr01 - View
Manihot esculenta Manes.06G150000 Chromosome06 - View
Manihot esculenta Manes.14G024500 Chromosome14 + View
Medicago truncatula Medtr6g053560 hypothetical protein chr6 - View
Nelumbo nucifera Nn1g01547 chr1 - View
Nelumbo nucifera Nn6g33404 chr6 + View
Nicotiana tabacum Nitab4.5_0000084g0160 SKP1 component, dimerisation, SKP1 component, BTB/POZ fold Nitab4.5_0000084 - View
Nicotiana tabacum Nitab4.5_0001951g0030 SKP1 component, BTB/POZ fold, SKP1 component, POZ domain, SKP1 component, dimerisation Nitab4.5_0001951 + View
Nicotiana tabacum Nitab4.5_0000080g0150 BTB/POZ fold, SKP1 component, POZ domain, SKP1 component, dimerisation, SKP1 component Nitab4.5_0000080 - View
Olea europaea Oeu022597.1 chr1 - View
Olea europaea Oeu004109.1 scaffold1148 - View
Petunia axillaris Peaxi162Scf00444g00422 SKP1-like 21 Peaxi162Scf00444 + View
Punica granatum PGR142G3012 NC_045128.1 + View
Prunus persica Prupe.2G297900 Pp02 - View
Populus trichocarpa Potri.015G146500 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Chr15 - View
Populus trichocarpa Potri.012G143500 PTHR11165//PTHR11165:SF61 - SKP1 // SUBFAMILY NOT NAMED Chr12 - View
Phaseolus vulgaris Phvul.004G113200 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED Chr04 + View
Rosa chinensis RcHm_v2.0_Chr1g0377851 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0199100 chr09 - View
Rhododendron simsii Rhsim03G0188300 chr03 - View
Striga asiatica SGA_v2.0_scaffold11G05666 scaffold11 - View
Salix brachista Sabra15G0155700 GWHAAZH00000015 - View
Salix brachista Sabra12G0107700 GWHAAZH00000012 - View
Sechium edule Sed0002306 LG05 - View
Sechium edule Sed0023699 LG01 - View
Solanum lycopersicum Solyc03g025420.3 SKP1-like protein 21 (AHRD V3.3 *** A0A2G2ZZ74_CAPAN) SL4.0ch03 + View
Solanum lycopersicum Solyc06g036070.3 SKP1-like protein 21 (AHRD V3.3 *** A0A1U8F5L4_CAPAN) SL4.0ch06 - View
Schrenkiella parvula Sp4g28020 PTHR11165:SF62 - SKP1-LIKE PROTEIN 20-RELATED ch4-6 - View
Solanum pennellii Sopen03g004260 SKP1-like 21 (SK21) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: SCF ubiquitin ligase complex | EXPRESSED IN: stem, fruit, root, inflorescence, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation , SKP1 component , BTB/POZ fold , SKP1 component, POZ | BEST Arabidopsis thaliana protein match is: SKP1-like 20 Spenn-ch03 + View
Solanum pennellii Sopen06g011820 SKP1-like 21 (SK21) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: SCF ubiquitin ligase complex | EXPRESSED IN: stem, fruit, root, inflorescence, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation , SKP1 component , BTB/POZ fold , SKP1 component, POZ | BEST Arabidopsis thaliana protein match is: SKP1-like 20 Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400029928 Ubiquitin-protein ligase ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400015800 Ubiquitin-protein ligase ST4.03ch03 - View
Selenicereus undatus Hund04769 Scaffold_19641 - View
Selenicereus undatus Hund11733 Scaffold_33679 + View
Trochodendron aralioides TAR374G0481 group12 - View
Trochodendron aralioides TAR375G0720 group15 - View
Theobroma cacao Thecc.01G358300 SKP1-like protein 21 Chromosome_1 + View
Theobroma cacao Thecc.03G180200 SKP1-like protein 21 Chromosome_3 - View
Tripterygium wilfordii TWI14G0896 NC_052249.1 - View
Vaccinium macrocarpon vmacro09826 Similar to ASK21: SKP1-like protein 21 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06653 Similar to ASK21: SKP1-like protein 21 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G1316 CM024077.1 + View
Vitis vinifera GSVIVG01028906001 chr16 - View