Gene: Sopen03g004260

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g004260
  • Transcript Identifier Sopen03g004260.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 2957283-2962514 : positive

Gene Family Information

  • ID HOM05D002506
  • #Genes/#Species 272/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g004260.1

Descriptions

  • Description SKP1-like 21 (SK21) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: SCF ubiquitin ligase complex | EXPRESSED IN: stem, fruit, root, inflorescence, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation , SKP1 component , BTB/POZ fold , SKP1 component, POZ | BEST Arabidopsis thaliana protein match is: SKP1-like 20
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011333 SKP1/BTB/POZ domain superfamily
IPR016897 S-phase kinase-associated protein 1
IPR001232 S-phase kinase-associated protein 1-like
IPR016072 SKP1 component, dimerisation
IPR036296 SKP1-like, dimerisation domain superfamily
Mapman id Description
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1