Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0016535 hypothetical protein POPTR_0016s08050g [Populus trichocarpa] Chr10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G7730 LG-10 - View
Acer truncatum Atru.chr8.1501 chr8 - View
Actinidia chinensis Actinidia07926 Lachesis_group0 - View
Actinidia chinensis Actinidia05424 Lachesis_group5 + View
Avicennia marina MSTRG.10369 ScioBoG_13798_HRSCAF_13862 + View
Avicennia marina MSTRG.19265 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy4G02771 CHR04 - View
Aquilegia oxysepala Aqoxy2G01159 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1RT5A7 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K8M445 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT3G52720 alpha carbonic anhydrase 1 Encodes an alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway%2C and becomes N-glycosylated before entering the chloroplast. Glycosylation and intra-molecular disulfide bridge fromation are necessary for the correct folding%2C ER export%2C trafficking and activity of the protein. alpha carbonic anhydrase 1 (ACA1)%3B FUNCTIONS IN: carbonate dehydratase activity%2C zinc ion binding%3B INVOLVED IN: one-carbon metabolic process%3B LOCATED IN: chloroplast stroma%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Carbonic anhydrase%2C alpha-class%2C catalytic domain (InterPro:IPR001148)%2C Carbonic anhydrase%2C CAH1-like (InterPro:IPR018340)%2C Carbonic anhydrase%2C alpha-class%2C conserved site (InterPro:IPR018338)%3B BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 7 (TAIR:AT1G08080.1)%3B Has 3348 Blast hits to 3336 proteins in 547 species: Archae - 0%3B Bacteria - 715%3B Metazoa - 2044%3B Fungi - 83%3B Plants - 327%3B Viruses - 0%3B Other Eukaryotes - 179 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB01g00347 ChrB01 + View
Brassica carinata BcaB02g07821 ChrB02 + View
Brassica carinata BcaC07g39637 ChrC07 - View
Brassica napus C08p28000 C08 - View
Brassica napus A09p45810 A09 - View
Brassica oleracea BolC8t50412H C8 - View
Beta vulgaris EL10Ac7g16910 K01674 - carbonic anhydrase (cah) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G397.54 PGAv.1.6.scaffold397 + View
Cannabis sativa CANSAT64G2356 NC_044379.1 + View
Corylus avellana Haze_19618 Similar to ACA1: Alpha carbonic anhydrase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc06_g05880 Putative Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 chr6 + View
Citrus clementina Ciclev10013720m.g scaffold_6 - View
Ceratophyllum demersum CDE02G3613 1 - View
Carpinus fangiana Cfa016614 Cfa07 + View
Cardamine hirsuta CARHR162590 Carbonic anhydrase family protein Chr5 - View
Carya illinoinensis CiPaw.09G014700 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.10G010200 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Chr10 + View
Citrullus lanatus ClCG10G018930 Carbonic anhydrase family protein CG_Chr10 - View
Cucumis melo MELO3C009476.2 Alpha carbonic anhydrase chr04 - View
Corchorus olitorius COL.COLO4_29724 Alpha carbonic anhydrase AWUE01020396.1 - View
Carica papaya Cpa.g.sc5.13 supercontig_5 - View
Chenopodium quinoa AUR62028516 ACA8: Alpha carbonic anhydrase 8 C_Quinoa_Scaffold_3100 - View
Chenopodium quinoa AUR62006188 ACA1: Alpha carbonic anhydrase 1, chloroplastic C_Quinoa_Scaffold_1001 + View
Capsella rubella Carub.0005s1917 PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED scaffold_5 - View
Cucumis sativus L. CsaV3_3G037320 Alpha carbonic anhydrase chr3 + View
Daucus carota DCAR_013393 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_007756 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv31690 GWHABJS00000015 + View
Durio zibethinus Duzib093G2106 NW_019167937.1 - View
Durio zibethinus Duzib128G0252 NW_019168481.1 - View
Durio zibethinus Duzib106G1117 NW_019168492.1 - View
Erigeron canadensis ECA236G0375 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.K02031 Chr11 - View
Erythranthe guttata Migut.L01784 scaffold_12 + View
Erythranthe guttata Migut.J01029 scaffold_10 - View
Eutrema salsugineum Thhalv10010611m.g scaffold_16 + View
Fragaria x ananassa FAN05G5349 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN05G2762 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN14G3959 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN02G1529 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN09G0362 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria vesca FvH4_6g18830 PTHR18952//PTHR18952:SF126 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D04G099200 K01674 - carbonic anhydrase (cah) D04 - View
Glycine max Glyma.10G073400 PTHR18952:SF86 - CARBONIC ANHYDRASE-LIKE PROTEIN 1-RELATED Gm10 + View
Gossypium raimondii Gorai.009G401600 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0820F.1_g223860 Hma1.2p1_0820F.1 + View
Lotus japonicus Lj5g0018613 K01674 - carbonic anhydrase (cah) chr5 - View
Lactuca sativa Lsat_1_v5_gn_8_77340 PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 - View
Magnolia biondii MBI17_g08338_MAGBIO AED:0.30 Chr17 - View
Malus domestica MD12G1024600 alpha carbonic anhydrase 1 Chr12 + View
Manihot esculenta Manes.09G054900 Chromosome09 - View
Medicago truncatula Medtr1g059900 eukaryotic-type carbonic anhydrase chr1 - View
Nelumbo nucifera Nn2g14168 chr2 + View
Nelumbo nucifera Nn6g34888 chr6 - View
Nicotiana tabacum Nitab4.5_0000692g0010 Alpha carbonic anhydrase, Carbonic anhydrase, alpha-class, conserved site, Carbonic anhydrase, alpha-class Nitab4.5_0000692 + View
Olea europaea Oeu041481.1 chr11 - View
Olea europaea Oeu047863.1 chr11 - View
Oryza sativa ssp. japonica Os04g0412500 Similar to OSIGBa0134P10.2 protein. chr04 + View
Oryza sativa ssp. japonica Os02g0533300 Carbonic anhydrase, CAH1-like domain containing protein. chr02 + View
Oryza sativa ssp. japonica Os12g0153500 Carbonic anhydrase, CAH1-like domain containing protein. chr12 + View
Punica granatum PGR142G3470 NC_045128.1 + View
Prunus persica Prupe.7G109300 Pp07 - View
Papaver somniferum PSO384G1675 NC_039368.1 - View
Papaver somniferum PSO339G1212 NC_039366.1 - View
Papaver somniferum PSO384G1547 NC_039368.1 + View
Populus trichocarpa Potri.016G079600 K01674 - carbonic anhydrase (cah) Chr16 - View
Populus trichocarpa Potri.006G212900 K01674 - carbonic anhydrase (cah) Chr06 - View
Quercus lobata QL07p038936 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0473841 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim03G0074700 chr03 - View
Striga asiatica SGA_v2.0_scaffold184G39966 scaffold184 + View
Striga asiatica SGA_v2.0_scaffold13G06710 scaffold13 - View
Salvia bowleyana SalBow5G4796 GWHASIU00000003 - View
Salix brachista Sabra06G0163900 GWHAAZH00000006 - View
Salix brachista Sabra16G0085500 GWHAAZH00000016 - View
Sechium edule Sed0005041 LG02 - View
Sechium edule Sed0023801 LG04 + View
Solanum lycopersicum Solyc09g009830.3 Alpha carbonic anhydrase (AHRD V3.3 *** A0A200QHP1_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp5g09620 PTHR18952//PTHR18952:SF129 - CARBONIC ANHYDRASE // SUBFAMILY NOT NAMED ch5-1 + View
Solanum pennellii Sopen09g004590 Encodes a putative alpha carbonic anhydrase (CAH1) located in the chloroplast stroma. Most chloroplast proteins are encoded by the nuclear genome and imported with the help of sorting signals that are intrinsic parts of the polypeptides. CAH1 takes an alternative route through the secretory pathway, and becomes N-glycosylated before entering the chloroplast. | alpha carbonic anhydrase 1 (ACA1) | FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding | INVOLVED IN: one-carbon metabolic process | LOCATED IN: chloroplast stroma | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain , Carbonic anhydrase, CAH1-like , Carbonic anhydrase, alpha-class, conserved site | BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 2 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400008954 Carbonic anhydrase family protein ST4.03ch09 - View
Selenicereus undatus Hund19927 Scaffold_33673 - View
Trochodendron aralioides TAR633G1160 group2 - View
Trochodendron aralioides TAR369G0170 group18 + View
Theobroma cacao Thecc.05G090000 Alpha carbonic anhydrase 1 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104804905 alpha carbonic anhydrase 1%2C chloroplastic-like NW_010960187.1 - View
Tripterygium wilfordii TWI53G1793 NC_052244.1 - View
Tripterygium wilfordii TWI74G0047 NC_052234.1 + View
Vaccinium macrocarpon vmacro07411 Similar to ACA1: Alpha carbonic anhydrase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01033852001 chr8 - View