Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0000866 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 3.1e-54 214.9 113 100.0
CSS0048640 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 3.6e-26 121.7 105 67.6
CSS0035550 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 3.7e-23 111.7 115 57.4
CSS0040156 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 1.2e-21 106.7 115 56.5
Actinidia05424 Actinidia chinensis HOM05D000550 ORTHO05D000400 5.4e-14 81.3 108 47.2
Rhsim03G0074700 Rhododendron simsii HOM05D000550 ORTHO05D000400 7.0e-14 80.9 105 45.7
Dinv21201 Davidia involucrata HOM05D010983 ORTHO05D000400 3.9e-12 75.1 110 42.7
CSS0016535 Camellia sinensis var. sinensis HOM05D000550 ORTHO05D000400 1.1e-11 73.6 105 43.8
QL07p038936 Quercus lobata HOM05D000550 ORTHO05D000400 2.5e-11 72.4 70 52.9
Dinv31691 Davidia involucrata HOM05D000550 ORTHO05D000400 1.2e-10 70.1 108 44.4
CiPaw.10G010200 Carya illinoinensis HOM05D000550 ORTHO05D000400 1.6e-10 69.7 67 50.7
TWI53G1793 Tripterygium wilfordii HOM05D000550 ORTHO05D000400 1.6e-10 69.7 92 41.3
TAR633G2743 Trochodendron aralioides HOM05D000550 ORTHO05D000400 2.8e-10 68.9 70 47.1
Haze_19618 Corylus avellana HOM05D000550 ORTHO05D000400 3.6e-10 68.6 87 41.4
Duzib106G1117 Durio zibethinus HOM05D000550 ORTHO05D000400 8.1e-10 67.4 90 42.2
vmacro00657 Vaccinium macrocarpon HOM05D000550 ORTHO05D000400 8.1e-10 67.4 104 42.3
Migut.L01784 Erythranthe guttata HOM05D000550 ORTHO05D000400 2.3e-09 65.9 104 42.3
Oeu047863.1 Olea europaea HOM05D000550 ORTHO05D000400 2.3e-09 65.9 108 43.5
Cfa016614 Carpinus fangiana HOM05D000550 ORTHO05D000400 3.1e-09 65.5 79 40.5
Duzib128G0252 Durio zibethinus HOM05D000550 ORTHO05D000400 5.2e-09 64.7 90 42.2
Sabra06G0163900 Salix brachista HOM05D000550 ORTHO05D000400 5.2e-09 64.7 81 42.0
Cc06_g05880 Coffea canephora HOM05D000550 ORTHO05D000400 6.8e-09 64.3 104 43.3
TAR633G1050 Trochodendron aralioides HOM05D000550 ORTHO05D000400 6.8e-09 64.3 70 44.3
vmacro07411 Vaccinium macrocarpon HOM05D000550 ORTHO05D000400 6.8e-09 64.3 75 49.3
Actinidia07926 Actinidia chinensis HOM05D000550 ORTHO05D000400 1.5e-08 63.2 104 40.4
SGA_v2.0_scaffold184G39966 Striga asiatica HOM05D000550 ORTHO05D000400 1.5e-08 63.2 104 44.2
CiPaw.09G014700 Carya illinoinensis HOM05D000550 ORTHO05D000400 2.0e-08 62.8 100 39.0
PGR142G3868 Punica granatum HOM05D000550 ORTHO05D000400 2.0e-08 62.8 78 41.0
GSVIVG01033852001 Vitis vinifera HOM05D000550 ORTHO05D000400 3.4e-08 62.0 107 39.3
Potri.006G212900 Populus trichocarpa HOM05D000550 ORTHO05D000400 4.4e-08 61.6 71 45.1
Rhsim09G0014200 Rhododendron simsii HOM05D000550 ORTHO05D000400 4.4e-08 61.6 124 37.9
TAR369G0170 Trochodendron aralioides HOM05D000550 ORTHO05D000400 4.4e-08 61.6 103 36.9
Thecc.05G090000 Theobroma cacao HOM05D000550 ORTHO05D000400 5.8e-08 61.2 107 43.0
Duzib093G2106 Durio zibethinus HOM05D000550 ORTHO05D000400 7.5e-08 60.8 74 44.6
TWI74G0047 Tripterygium wilfordii HOM05D000550 ORTHO05D000400 9.9e-08 60.5 92 38.0
Ciclev10013720m.g Citrus clementina HOM05D000550 ORTHO05D000400 1.3e-07 60.1 99 35.4
PGR142G3089 Punica granatum HOM05D000550 ORTHO05D000400 1.3e-07 60.1 83 37.3
CANSAT64G2356 Cannabis sativa HOM05D000550 ORTHO05D000400 1.7e-07 59.7 70 44.3
COL.COLO4_29724 Corchorus olitorius HOM05D000550 ORTHO05D000400 1.7e-07 59.7 70 44.3
RcHm_v2.0_Chr3g0473841 Rosa chinensis HOM05D000550 ORTHO05D000400 1.7e-07 59.7 66 40.9
Gorai.009G401600 Gossypium raimondii HOM05D000550 ORTHO05D000400 2.9e-07 58.9 72 47.2
Prupe.7G109300 Prunus persica HOM05D000550 ORTHO05D000400 2.9e-07 58.9 70 45.7
TAR633G1160 Trochodendron aralioides HOM05D000550 ORTHO05D000400 2.9e-07 58.9 65 46.2
Sabra16G0085500 Salix brachista HOM05D000550 ORTHO05D000400 3.7e-07 58.5 70 44.3
Sabra16G0087600 Salix brachista HOM05D000550 ORTHO05D000400 3.7e-07 58.5 70 44.3
MD12G1024600 Malus domestica HOM05D000550 ORTHO05D000400 4.9e-07 58.2 102 41.2
Eucgr.K02031 Eucalyptus grandis HOM05D000550 ORTHO05D000400 8.3e-07 57.4 106 35.8
Medtr1g059960 Medicago truncatula HOM05D000550 ORTHO05D000400 1.4e-06 56.6 97 34.0
Nn6g34888 Nelumbo nucifera HOM05D000550 ORTHO05D000400 1.4e-06 56.6 69 42.0
Gohir.D04G099200 Gossypium hirsutum HOM05D000550 ORTHO05D000400 1.9e-06 56.2 72 45.8
Nn2g14168 Nelumbo nucifera HOM05D000550 ORTHO05D000400 1.9e-06 56.2 67 43.3
SalBow5G4796 Salvia bowleyana HOM05D000550 ORTHO05D000400 1.9e-06 56.2 68 42.6
Gohir.D04G099300 Gossypium hirsutum HOM05D000550 ORTHO05D000400 3.2e-06 55.5 70 44.3
Potri.016G079600 Populus trichocarpa HOM05D000550 ORTHO05D000400 4.1e-06 55.1 70 42.9
Aqoxy4G02771 Aquilegia oxysepala HOM05D000550 ORTHO05D000400 5.4e-06 54.7 86 38.4
Lalb_Chr22g0359571 Lupinus albus HOM05D000550 ORTHO05D000400 5.4e-06 54.7 105 36.2
PSO384G1675 Papaver somniferum HOM05D000550 ORTHO05D000400 5.4e-06 54.7 69 42.0
SGA_v2.0_scaffold13G06710 Striga asiatica HOM05D000550 ORTHO05D000400 7.1e-06 54.3 68 42.6
Phvul.007G152600 Phaseolus vulgaris HOM05D000550 ORTHO05D000400 9.2e-06 53.9 70 38.6


User provided reference genes

Program Settings