Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0038266 PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 [Nelumbo nucifera] Chr2 - View
CSS0007265 Peptidyl-prolyl cis-trans isomerase CYP40 [Morus notabilis] Chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G13370 LG-8 - View
Acer truncatum Atru.chr3.411 chr3 - View
Acer truncatum Atru.chr5.2808 chr5 - View
Actinidia chinensis Actinidia36506 Lachesis_group4 - View
Actinidia chinensis Actinidia00463 Lachesis_group12 + View
Avicennia marina MSTRG.2901 ScioBoG_102835_HRSCAF_103059 - View
Amaranthus hybridus Ah.01g020090 AmaHy_arrow1_Scaffold_1 + View
Amaranthus hybridus Ah.02g124030 AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy5G01301 CHR05 - View
Aquilegia oxysepala Aqoxy6G01434 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.W8GZLX K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) arahy.Tifrunner.gnm1.Arahy.10 + View
Arabidopsis thaliana AT2G15790 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010%2C Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. SQUINT (SQN)%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide TPR2 (InterPro:IPR013105)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type%2C conserved site (InterPro:IPR020892)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT3G63400.3)%3B Has 20219 Blast hits to 19939 proteins in 2706 species: Archae - 114%3B Bacteria - 6925%3B Metazoa - 4764%3B Fungi - 1760%3B Plants - 1912%3B Viruses - 4%3B Other Eukaryotes - 4740 (source: NCBI BLink). Chr2 - View
Beta vulgaris EL10Ac9g21823 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G836.60 PGAv.1.6.scaffold836 + View
Capsicum annuum CAN.G322.31 PGAv.1.6.scaffold322 - View
Cannabis sativa CANSAT25G3887 NC_044370.1 + View
Cicer arietinum L. Ca_18663_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_22195_v3 Ca_LG7_v3 - View
Corylus avellana Haze_01886 Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_15436 Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc07_g05790 Peptidyl-prolyl cis-trans isomerase CYP40 chr7 + View
Coffea canephora Cc02_g18500 Peptidyl-prolyl cis-trans isomerase CYP40 chr2 + View
Citrus clementina Ciclev10028706m.g scaffold_8 - View
Carpinus fangiana Cfa003988 Cfa01 + View
Carpinus fangiana Cfa005430 Cfa02 + View
Cardamine hirsuta CARHR106170 Peptidyl-prolyl cis-trans isomerase B Chr3 - View
Carya illinoinensis CiPaw.05G054800 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr05 - View
Carya illinoinensis CiPaw.06G142000 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr06 + View
Carya illinoinensis CiPaw.01G022500 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr01 - View
Citrullus lanatus ClCG02G005740 Peptidyl-prolyl cis-trans isomerase B CG_Chr02 + View
Citrullus lanatus ClCG09G017490 Peptidyl-prolyl cis-trans isomerase B CG_Chr09 - View
Cucumis melo MELO3C021912.2 Peptidyl-prolyl cis-trans isomerase chr11 + View
Cucumis melo MELO3C018433.2 Peptidyl-prolyl cis-trans isomerase chr01 + View
Carica papaya Cpa.g.sc6.386 supercontig_6 - View
Carica papaya Cpa.g.sc62.44 supercontig_62 - View
Chenopodium quinoa AUR62003847 CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 C_Quinoa_Scaffold_2370 + View
Chenopodium quinoa AUR62016632 CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 C_Quinoa_Scaffold_3670 - View
Chenopodium quinoa AUR62011429 CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 C_Quinoa_Scaffold_3333 + View
Chenopodium quinoa AUR62001959 CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 C_Quinoa_Scaffold_4480 - View
Cucumis sativus L. CsaV3_7G008790 Peptidyl-prolyl cis-trans isomerase chr7 - View
Cucumis sativus L. CsaV3_2G014150 Peptidyl-prolyl cis-trans isomerase chr2 - View
Daucus carota DCAR_025710 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv23590 GWHABJS00000005 - View
Davidia involucrata Dinv42127 GWHABJS00000002 - View
Erigeron canadensis ECA236G0775 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA232G4392 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.I01174 Chr09 - View
Erythranthe guttata Migut.H00462 scaffold_8 - View
Erythranthe guttata Migut.N01202 scaffold_14 - View
Fragaria x ananassa FAN24G0266 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb2-2 + View
Fragaria x ananassa FAN19G0626 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb1-4 + View
Fragaria x ananassa FAN15G1273 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb2-4 - View
Fragaria x ananassa FAN23G1324 PTHR11071:SF259 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 Fvb1-3 + View
Fragaria x ananassa FAN27G2452 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb2-1 - View
Fragaria x ananassa FAN28G0200 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb1-1 - View
Fragaria x ananassa FAN20G0955 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb2-3 + View
Fragaria x ananassa FAN26G0861 PF00160//PF13181//PF13414 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8) // TPR repeat (TPR_11) Fvb1-2 + View
Fragaria vesca FvH4_1g15560 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb1 + View
Fragaria vesca FvH4_2g06830 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Fvb2 - View
Gossypium hirsutum Gohir.A13G037900 PF00160//PF07719//PF13414 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) A13 + View
Gossypium hirsutum Gohir.A02G159966 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) A02 - View
Gossypium hirsutum Gohir.A12G082500 PF00160//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8) A12 + View
Gossypium hirsutum Gohir.D10G095600 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) D10 + View
Gossypium hirsutum Gohir.D03G020200 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) D03 + View
Gossypium hirsutum Gohir.A10G092800 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) A10 - View
Gossypium hirsutum Gohir.D02G212200 PF00160//PF00515//PF07719 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) D02 + View
Gossypium hirsutum Gohir.D13G036300 PF00160//PF07719//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_8) D13 + View
Gossypium hirsutum Gohir.A03G191300 PF00160//PF00515//PF07719 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_2) A03 + View
Gossypium hirsutum Gohir.D12G089201 PTHR11071//PTHR11071:SF259 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 D12 + View
Glycine max Glyma.05G080800 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Gm05 - View
Glycine max Glyma.17G177600 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Gm17 - View
Glycine max Glyma.07G210200 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Gm07 + View
Glycine max Glyma.02G134800 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Gm02 - View
Gossypium raimondii Gorai.003G021400 Chr03 + View
Gossypium raimondii Gorai.005G240200 Chr05 + View
Gossypium raimondii Gorai.011G104900 Chr11 + View
Gossypium raimondii Gorai.008G073900 Chr08 + View
Gossypium raimondii Gorai.013G041000 Chr13 + View
Helianthus annuus HanXRQChr14g0430681 Probable peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase HanXRQChr14 - View
Lupinus albus Lalb_Chr05g0219011 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Lalb_Chr05 + View
Lotus japonicus Lj4g0010067 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) chr4 + View
Lonicera japonica Lj4A139G82 GWHAAZE00000004 + View
Lonicera japonica Lj9A360G70 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_87800 PF00160//PF13181 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_8) Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_4_168960 Lsat_1_v8_lg_4 - View
Magnolia biondii MBI02_g32603_MAGBIO AED:0.19 Chr02 + View
Malus domestica MD02G1167800 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase Chr02 + View
Malus domestica MD15G1280000 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase Chr15 + View
Malus domestica MD05G1075200 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase Chr05 + View
Manihot esculenta Manes.15G143100 Chromosome15 - View
Medicago truncatula Medtr8g079690 peptidyl-prolyl cis-trans isomerase D chr8 + View
Medicago truncatula Medtr4g086760 peptidyl-prolyl cis-trans isomerase D chr4 - View
Nelumbo nucifera Nn5g30171 chr5 + View
Petunia axillaris Peaxi162Scf00016g01634 Peptidyl-prolyl cis-trans isomerase D Peaxi162Scf00016 + View
Petunia axillaris Peaxi162Scf00993g00331 Peptidyl-prolyl cis-trans isomerase D Peaxi162Scf00993 + View
Punica granatum PGR142G3372 NC_045128.1 + View
Prunus persica Prupe.8G116600 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Pp08 + View
Prunus persica Prupe.7G137400 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Pp07 - View
Pisum sativum Psat7g121680 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD chr7LG7 + View
Papaver somniferum PSO170G1556 NC_039360.1 + View
Papaver somniferum PSO675G8259 NC_039358.1 + View
Populus trichocarpa Potri.004G144300 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr04 - View
Populus trichocarpa Potri.007G040100 PF00160//PF00515 - Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase) // Tetratricopeptide repeat (TPR_1) Chr07 + View
Populus trichocarpa Potri.009G106200 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr09 - View
Populus trichocarpa Potri.005G135500 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr05 + View
Phaseolus vulgaris Phvul.003G246400 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr03 - View
Phaseolus vulgaris Phvul.003G294200 K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) Chr03 + View
Quercus lobata QL11p038266 11 - View
Quercus lobata QL06p042523 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0104891 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim11G0168800 chr11 - View
Rhododendron simsii Rhsim08G0103300 chr08 - View
Rhododendron simsii Rhsim10G0121100 chr10 + View
Striga asiatica SGA_v2.0_scaffold15G07254 scaffold15 + View
Salvia bowleyana SalBow3G0531 GWHASIU00000006 + View
Salix brachista Sabra09G0081100 GWHAAZH00000009 - View
Salix brachista Sabra07G0036300 GWHAAZH00000007 + View
Simmondsia chinensis Sc03g0001370 GWHAASQ00000003 + View
Sechium edule Sed0000257 LG10 - View
Solanum lycopersicum Solyc01g108340.3 Peptidyl-prolyl cis-trans isomerase D (AHRD V3.3 *** A0A2G3BVL2_CAPCH) SL4.0ch01 + View
Solanum lycopersicum Solyc02g090480.4 Peptidyl-prolyl cis-trans isomerase CYP40 (AHRD V3.3 *** A0A2G3ABJ7_CAPAN) SL4.0ch02 + View
Solanum pennellii Sopen01g050560 SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. | SQUINT (SQN) | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type , Tetratricopeptide-like helical , Tetratricopeptide TPR2 , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Spenn-ch01 + View
Solanum pennellii Sopen02g035160 SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. | SQUINT (SQN) | CONTAINS InterPro DOMAIN/s: Cyclophilin-like , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type , Tetratricopeptide-like helical , Tetratricopeptide TPR2 , Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400025806 Peptidyl-prolyl cis-trans isomerase d, ppid ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400010060 Peptidyl-prolyl cis-trans isomerase d, ppid ST4.03ch02 - View
Selenicereus undatus Hund00322 Scaffold_33678 + View
Selenicereus undatus Hund13574 Scaffold_33679 - View
Trochodendron aralioides TAR628G1316 group5 - View
Trochodendron aralioides TAR381G0616 group11 + View
Trochodendron aralioides TAR625G0057 group4 + View
Theobroma cacao Thecc.02G096200 Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase Chromosome_2 + View
Theobroma cacao Thecc.01G051500 Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 / rotamase Chromosome_1 + View
Tripterygium wilfordii TWI75G0025 NC_052253.1 + View
Vaccinium macrocarpon vmacro02177 Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17928 Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05320 Similar to CYP40: Peptidyl-prolyl cis-trans isomerase CYP40 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G0464 CM024069.1 + View
Vigna mungo VMungo0251G2020 CM024069.1 - View
Vitis vinifera GSVIVG01031799001 chr3 - View