Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0019733 hypothetical protein POPTR_0001s29750g [Populus trichocarpa] Chr3 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G6440 LG-8 - View
Acer truncatum Atru.chr5.2303 chr5 + View
Actinidia chinensis Actinidia04394 Lachesis_group7 + View
Arabidopsis lyrata AL3G46300 scaffold_3 + View
Arabidopsis lyrata AL1G57570 scaffold_1 - View
Arabidopsis lyrata AL3G33100 scaffold_3 - View
Avicennia marina MSTRG.20236 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.804FU2 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ESII2D 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G50000 methyltransferase methyltransferases%3B FUNCTIONS IN: methyltransferase activity%3B INVOLVED IN: rRNA processing%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947)%2C Ribosomal RNA small subunit methyltransferase E (InterPro:IPR006700)%3B Has 5958 Blast hits to 5958 proteins in 2191 species: Archae - 0%3B Bacteria - 4231%3B Metazoa - 2%3B Fungi - 0%3B Plants - 34%3B Viruses - 0%3B Other Eukaryotes - 1691 (source: NCBI BLink). Chr1 - View
Brassica napus A06p03430 A06 + View
Brassica oleracea BolC7t41323H C7 - View
Brassica rapa BraA06t23551Z A06 + View
Beta vulgaris EL10Ac9g22180 Chr9_EL10_PGA_scaffold8 + View
Capsicum annuum CAN.G606.68 PGAv.1.6.scaffold606 - View
Cannabis sativa CANSAT25G2862 NC_044370.1 + View
Cicer arietinum L. Ca_11027_v3 Ca_LG4_v3 + View
Corylus avellana Haze_10309 Similar to ZED1: Non-functional pseudokinase ZED1 (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10030269m.g scaffold_8 + View
Ceratophyllum demersum CDE07G0917 5 - View
Ceratophyllum demersum CDE04G1257 2 - View
Carpinus fangiana Cfa004703 Cfa02 + View
Cardamine hirsuta CARHR095120 unknown protein Chr3 - View
Carya illinoinensis CiPaw.05G020400 Chr05 - View
Carya illinoinensis CiPaw.06G164200 KOG3383 - Uncharacterized conserved protein Chr06 + View
Citrullus lanatus ClCG02G007120 Ribosomal RNA small subunit methyltransferase E CG_Chr02 - View
Citrullus lanatus ClCG10G010070 Thymocyte nuclear protein CG_Chr10 + View
Cucumis melo MELO3C018020.2 At3g19660 chr07 - View
Cucumis melo MELO3C018530.2 ribosomal RNA small subunit methyltransferase E chr01 - View
Capsella rubella Carub.0003s2869 KOG3383 - Uncharacterized conserved protein scaffold_3 + View
Cucumis sativus L. CsaV3_4G000110 Ubiquinol-cytochrome C reductase chr4 + View
Cucumis sativus L. CsaV3_7G007700 ribosomal RNA small subunit methyltransferase E chr7 + View
Daucus carota DCAR_021945 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv09541 GWHABJS00000005 - View
Durio zibethinus Duzib132G0295 NW_019167915.1 - View
Durio zibethinus Duzib248G0869 NW_019168048.1 - View
Durio zibethinus Duzib052G0823 NW_019167849.1 + View
Eucalyptus grandis Eucgr.I02493 Chr09 - View
Erythranthe guttata Migut.B00459 scaffold_2 - View
Fragaria x ananassa FAN27G2772 KOG3383 - Uncharacterized conserved protein Fvb2-1 + View
Fragaria x ananassa FAN24G1537 Fvb2-2 - View
Fragaria x ananassa FAN15G0831 KOG3383 - Uncharacterized conserved protein Fvb2-4 + View
Fragaria vesca FvH4_2g03350 KOG3383 - Uncharacterized conserved protein Fvb2 + View
Gossypium hirsutum Gohir.D02G203199 D02 + View
Gossypium hirsutum Gohir.A13G047600 A13 - View
Gossypium hirsutum Gohir.D13G045900 D13 - View
Gossypium hirsutum Gohir.A03G181200 A03 + View
Gossypium hirsutum Gohir.D12G019200 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase D12 + View
Gossypium hirsutum Gohir.A12G018701 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase A12 + View
Glycine max Glyma.01G241600 KOG3383 - Uncharacterized conserved protein Gm01 + View
Glycine max Glyma.20G135600 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Gm20 - View
Gossypium raimondii Gorai.013G051400 Chr13 - View
Gossypium raimondii Gorai.008G019500 Chr08 + View
Gossypium raimondii Gorai.005G230000 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0661F.1_g198113 Hma1.2p1_0661F.1 + View
Hydrangea macrophylla Hma1.2p1_1051F.1_g252100 Hma1.2p1_1051F.1 - View
Lupinus albus Lalb_Chr06g0165001 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0144911 Lalb_Chr02 + View
Lotus japonicus Lj1g0027535 KOG3383 - Uncharacterized conserved protein chr1 + View
Lonicera japonica Lj9A337T44 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_5_117140 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_9_113420 Lsat_1_v8_lg_9 - View
Magnolia biondii MBI16_g16470_MAGBIO AED:0.28 Chr16 - View
Magnolia biondii MBI16_g39097_MAGBIO AED:0.31 Chr16 - View
Malus domestica MD05G1104700 Protein of unknown function Chr05 - View
Malus domestica MD10G1109000 Protein of unknown function Chr10 - View
Manihot esculenta Manes.07G057400 Chromosome07 + View
Manihot esculenta Manes.10G086400 Chromosome10 - View
Medicago truncatula Medtr1g106055 ribosomal RNA small subunit methyltransferase E chr1 + View
Medicago truncatula Medtr5g005330 hypothetical protein chr5 - View
Nelumbo nucifera Nn6g34513 chr6 - View
Olea europaea Oeu037288.1 chr5 - View
Petunia axillaris Peaxi162Scf00003g02832 Unknown protein Peaxi162Scf00003 - View
Petunia axillaris Peaxi162Scf00016g03013 Unknown protein Peaxi162Scf00016 - View
Punica granatum PGR142G4268 NC_045128.1 - View
Prunus persica Prupe.8G149100 Pp08 - View
Pisum sativum Psat6g214440 RNA methyltransferase chr6LG2 + View
Papaver somniferum PSO675G4557 NC_039358.1 - View
Populus trichocarpa Potri.009G085700 KOG3383 - Uncharacterized conserved protein Chr09 + View
Populus trichocarpa Potri.001G290100 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Chr01 + View
Phaseolus vulgaris Phvul.002G050900 KOG3383 - Uncharacterized conserved protein Chr02 + View
Phaseolus vulgaris Phvul.007G046900 Chr07 - View
Quercus lobata QL11p029372 11 + View
Rhododendron simsii Rhsim05G0092200 chr05 - View
Striga asiatica SGA_v2.0_scaffold32G12987 scaffold32 + View
Salvia bowleyana SalBow6G4520 GWHASIU00000002 - View
Salix brachista Sabra09G0065800 GWHAAZH00000009 + View
Salix brachista Sabra16G0181700 GWHAAZH00000016 + View
Sechium edule Sed0014293 LG07 - View
Sechium edule Sed0007286 LG13 + View
Sechium edule Sed0001915 LG07 + View
Sechium edule Sed0001597 LG10 + View
Sapria himalayana SHI05019 scaffold8_16897533 - View
Solanum lycopersicum Solyc10g048190.1 EVE domain (AHRD V3.3 *** A0A200QGB1_9MAGN) SL4.0ch10 + View
Solanum lycopersicum Solyc01g106880.3 Ribosomal RNA small subunit methyltransferase E (AHRD V3.3 *** A0A1J3G4Z5_NOCCA) SL4.0ch01 + View
Solanum pennellii Sopen01g049160 methyltransferases | FUNCTIONS IN: methyltransferase activity | INVOLVED IN: rRNA processing | LOCATED IN: chloroplast | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase-like , Ribosomal RNA small subunit methyltransferase E Spenn-ch01 + View
Solanum pennellii Sopen10g020220 unknown protein | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0310 Spenn-ch10 + View
Solanum tuberosum PGSC0003DMG400012841 Conserved gene of unknown function ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG402025733 Gene of unknown function ST4.03ch01 + View
Trochodendron aralioides TAR376G0809 group14 + View
Trochodendron aralioides TAR625G0364 group4 - View
Trochodendron aralioides TAR628G1281 group5 + View
Theobroma cacao Thecc.02G119400 Uncharacterized protein Chromosome_2 - View
Trifolium pratense TPR.G21139 Tp57577_TGAC_v2_LG1 - View
Trifolium pratense TPR.G8318 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI23G0417 NC_052239.1 + View
Tripterygium wilfordii TWI59G0092 NC_052248.1 - View
Vigna mungo VMungo1215G1258 CM024074.1 - View
Vigna mungo VMungo0720G2114 CM024071.1 + View
Vitis vinifera GSVIVG01037056001 chr3 - View