Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G3960 LG-8 - View
Aethionema arabicum Aa31LG11G7920 LG-11 - View
Acer truncatum Atru.chr2.152 chr2 - View
Acer truncatum Atru.chr4.2965 chr4 - View
Actinidia chinensis Actinidia40353 Lachesis_group22 + View
Actinidia chinensis Actinidia16853 Lachesis_group12 + View
Arabidopsis lyrata AL3G29860 scaffold_3 - View
Arabidopsis lyrata AL8G23000 scaffold_8 - View
Avicennia marina MSTRG.3868 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.04g154860 Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (Protein PENTATRICOPEPTIDE REPEAT 40) AmaHy_arrow1_Scaffold_4 + View
Aquilegia oxysepala Aqoxy2G02793 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TF3LVT arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YQC48T arahy.Tifrunner.gnm1.Arahy.04 + View
Arabidopsis thaliana AT3G16890 pentatricopeptide (PPR) domain protein 40 Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein%2C PPR40%2C which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt%2C ABA and oxidative stress%2C as well as reduced electron transport through Complex III (cytochrome c reductase). pentatricopeptide (PPR) domain protein 40 (PPR40)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G39710.1)%3B Has 55842 Blast hits to 14078 proteins in 304 species: Archae - 4%3B Bacteria - 51%3B Metazoa - 561%3B Fungi - 1019%3B Plants - 52283%3B Viruses - 0%3B Other Eukaryotes - 1924 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G49350 Glycine-rich protein family Glycine-rich protein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: hypocotyl%2C root%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56320.1)%3B Has 238380 Blast hits to 50570 proteins in 2556 species: Archae - 501%3B Bacteria - 82085%3B Metazoa - 74414%3B Fungi - 14097%3B Plants - 19695%3B Viruses - 3313%3B Other Eukaryotes - 44275 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0706G131 AmTr_v1.0_scaffold00057 + View
Brassica carinata BcaNung02598 Contig906 - View
Brassica napus A06p38390 A06 + View
Brassica napus A01p37370 A01 + View
Brassica napus A05p32770 A05 + View
Brassica oleracea BolC7t44514H C7 - View
Brassica rapa BraA01t03795Z A01 + View
Brassica rapa BraA06t26753Z A06 + View
Brassica rapa BraA05t22099Z A05 + View
Beta vulgaris EL10Ac3g04919 K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Chr3_EL10_PGA_scaffold7 + View
Capsicum annuum CAN.G197.15 PGAv.1.6.scaffold197 + View
Corylus avellana Haze_04077 Protein of unknown function 2 + View
Corylus avellana Haze_01077 Similar to PPR40: Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc03_g01100 Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial chr3 + View
Citrus clementina Ciclev10006939m.g scaffold_9 + View
Citrus clementina Ciclev10003751m.g scaffold_5 - View
Ceratophyllum demersum CDE02G3715 1 - View
Carpinus fangiana Cfa006686 Cfa02 - View
Cardamine hirsuta CARHR092170 Pentatricopeptide repeat-containing protein Chr3 - View
Cardamine hirsuta CARHR182180 Glycine-rich protein Chr6 + View
Carya illinoinensis CiPaw.02G076500 PF13041 - PPR repeat family (PPR_2) Chr02 + View
Carya illinoinensis CiPaw.07G028300 Chr07 - View
Carya illinoinensis CiPaw.01G141700 Chr01 + View
Citrullus lanatus ClCG06G004730 Glycine-rich protein CG_Chr06 + View
Citrullus lanatus ClCG05G006410 Pentatricopeptide repeat-containing protein, putative CG_Chr05 - View
Cucumis melo MELO3C035194.2 Glycine-rich family protein, putative isoform 1 chr11 - View
Cucumis melo MELO3C006701.2 Pentatricopeptide repeat-containing protein chr06 - View
Carica papaya Cpa.g.sc9.92 supercontig_9 + View
Chenopodium quinoa AUR62005275 Protein of unknown function C_Quinoa_Scaffold_3820 - View
Chenopodium quinoa AUR62016141 PPR40: Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial C_Quinoa_Scaffold_3256 + View
Chenopodium quinoa AUR62042953 PPR40: Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial C_Quinoa_Scaffold_3287 - View
Capsella rubella Carub.0003s1662 PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) scaffold_3 - View
Capsella rubella Carub.0008s0925 scaffold_8 - View
Cucumis sativus L. CsaV3_6G022510 Glycine-rich protein family chr6 + View
Cucumis sativus L. CsaV3_3G015050 Pentatricopeptide repeat-containing protein, putative chr3 - View
Daucus carota DCAR_027017 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_023333 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv44314 GWHABJS00000014 - View
Durio zibethinus Duzib177G0976 NW_019168004.1 - View
Durio zibethinus Duzib151G1201 NW_019167904.1 - View
Erigeron canadensis ECA233G1761 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G3411 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.H04030 Chr08 - View
Erythranthe guttata Migut.N00054 scaffold_14 + View
Erythranthe guttata Migut.G00097 scaffold_7 + View
Eutrema salsugineum Thhalv10004800m.g scaffold_6 + View
Eutrema salsugineum Thhalv10022362m.g PF13041 - PPR repeat family (PPR_2) scaffold_13 + View
Fragaria x ananassa FAN12G1068 Fvb4-3 - View
Fragaria x ananassa FAN12G3242 Fvb4-3 + View
Fragaria x ananassa FAN02G3556 Fvb6-4 - View
Fragaria x ananassa FAN05G3647 Fvb6-3 + View
Fragaria x ananassa FAN07G2635 Fvb4-4 + View
Fragaria vesca FvH4_4g19330 Fvb4 - View
Fragaria vesca FvH4_6g07260 Fvb6 - View
Gossypium hirsutum Gohir.A09G064700 PF13041 - PPR repeat family (PPR_2) A09 - View
Gossypium hirsutum Gohir.D11G282100 D11 + View
Gossypium hirsutum Gohir.A10G167900 A10 + View
Gossypium hirsutum Gohir.D10G174000 D10 + View
Glycine max Glyma.10G147900 Gm10 + View
Glycine max Glyma.15G143900 Gm15 + View
Glycine max Glyma.09G038800 Gm09 + View
Gossypium raimondii Gorai.011G194700 Chr11 + View
Gossypium raimondii Gorai.006G078600 Chr06 - View
Gossypium raimondii Gorai.007G304800 Chr07 + View
Helianthus annuus HanXRQChr05g0148181 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0013F.1_g008880 Hma1.2p1_0013F.1 + View
Hydrangea macrophylla Hma1.2p1_0078F.1_g040150 Hma1.2p1_0078F.1 + View
Lupinus albus Lalb_Chr18g0058901 Lalb_Chr18 + View
Lupinus albus Lalb_Chr20g0120971 Lalb_Chr20 + View
Lotus japonicus Lj5g0002521 chr5 + View
Lotus japonicus Lj6g0008376 chr6 - View
Lonicera japonica Lj6A687G28 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_6_114241 Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_6_19160 Lsat_1_v8_lg_6 + View
Magnolia biondii MBI18_g28459_MAGBIO AED:0.09 Chr18 + View
Malus domestica MD16G1158500 Glycine-rich protein family Chr16 + View
Malus domestica MD13G1157600 Glycine-rich protein family Chr13 + View
Malus domestica MD04G1195000 Glycine-rich protein family Chr04 + View
Manihot esculenta Manes.09G176000 Chromosome09 - View
Manihot esculenta Manes.03G202000 Chromosome03 - View
Medicago truncatula Medtr1g083900 Novel family chr1 - View
Medicago truncatula Medtr2g034760 Novel family chr2 + View
Nelumbo nucifera Nn4g25640 chr4 + View
Nelumbo nucifera Nn3g21645 chr3 - View
Nicotiana tabacum Nitab4.5_0000169g0080 Unknown Nitab4.5_0000169 - View
Oryza sativa ssp. japonica Os12g0557800 Pentatricopeptide repeat domain containing protein. chr12 - View
Oryza sativa ssp. japonica Os03g0304100 Conserved hypothetical protein. chr03 - View
Oryza sativa ssp. japonica Os05g0355900 Conserved hypothetical protein. chr05 + View
Petunia axillaris Peaxi162Scf00065g00322 Glycine-rich protein family Peaxi162Scf00065 + View
Punica granatum PGR004G0577 NC_045131.1 + View
Prunus persica Prupe.1G123300 Pp01 + View
Prunus persica Prupe.6G314800 Pp06 + View
Pisum sativum Psat1g159880 Mov34/MPN/PAD-1 chr1LG6 - View
Papaver somniferum PSO170G5203 NC_039360.1 + View
Papaver somniferum PSO210G2776 NC_039359.1 - View
Papaver somniferum PSO761G0121 NW_020622381.1 - View
Populus trichocarpa Potri.005G019200 Chr05 + View
Populus trichocarpa Potri.008G108300 PF13041 - PPR repeat family (PPR_2) Chr08 + View
Phaseolus vulgaris Phvul.007G200600 Chr07 - View
Phaseolus vulgaris Phvul.009G254100 Chr09 - View
Quercus lobata QL06p011459 6 - View
Rosa chinensis RcHm_v2.0_Chr3g0456891 RcHm_v2.0_Chr3 - View
Rosa chinensis RcHm_v2.0_Chr4g0424351 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0232700 chr04 - View
Striga asiatica SGA_v2.0_scaffold18G08390 scaffold18 - View
Salvia bowleyana SalBow8G4791 GWHASIU00000004 - View
Salix brachista Sabra05G0012900 GWHAAZH00000005 + View
Salix brachista Sabra08G0082100 GWHAAZH00000008 + View
Salix brachista Sabra05G0025700 GWHAAZH00000005 + View
Simmondsia chinensis Sc13g0006330 GWHAASQ00000013 - View
Sechium edule Sed0015924 LG12 + View
Sechium edule Sed0022311 LG04 + View
Sapria himalayana SHI00165 scaffold1_25991295 - View
Solanum lycopersicum Solyc01g060250.2 Unknown protein SL4.0ch01 + View
Schrenkiella parvula Sp3g15130 PF13041 - PPR repeat family (PPR_2) ch3-1 - View
Schrenkiella parvula Sp2g19700 ch2-4 - View
Solanum pennellii Sopen01g026450 Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase). | pentatricopeptide (PPR) domain protein 40 (PPR40) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG403007553 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund11954 Scaffold_33679 - View
Selenicereus undatus Hund03099 Scaffold_19641 - View
Selenicereus undatus Hund07137 Scaffold_33676 - View
Trochodendron aralioides TAR362G0953 group17 + View
Trochodendron aralioides TAR365G0161 group16 + View
Trochodendron aralioides TAR633G0381 group2 - View
Theobroma cacao Thecc.05G321400 Uncharacterized protein Chromosome_5 - View
Theobroma cacao Thecc.04G296000 Glycine-rich family protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC109116877 OTU domain-containing protein 5-A isoform X1 NW_010966177.1 + View
Tripterygium wilfordii TWI09G1526 NC_052245.1 - View
Tripterygium wilfordii TWI73G0446 NC_052232.1 + View
Utricularia gibba unitig_748.g8711 unitig_748 + View
Vaccinium macrocarpon vmacro08072 Similar to PPR40: Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0625 CM024071.1 + View
Vigna mungo VMungo1309G0802 CM024072.1 + View
Vitis vinifera GSVIVG01035038001 chr5 + View
Zea mays Zm00001eb014450 Zm00001e001411 Putative uncharacterized protein Glycine-rich protein family 1 - View