Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0010994 hypothetical protein VITISV_016382 [Vitis vinifera] Chr1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G2070 LG-3 + View
Acer truncatum Atru.BG.218.p chr8 + View
Acer truncatum Atru.chr12.631 chr12 + View
Actinidia chinensis Actinidia19715 Lachesis_group17 - View
Actinidia chinensis Actinidia03026 Lachesis_group22 + View
Arabidopsis lyrata AL6G12240 scaffold_6 + View
Arabidopsis lyrata AL3G20860 scaffold_3 + View
Avicennia marina MSTRG.19138 ScioBoG_25048_HRSCAF_25167 + View
Amaranthus hybridus Ah.08g211930 Pentatricopeptide repeat-containing protein At3g09650, chloroplastic (Protein HIGH CHLOROPHYLL FLUORESCENCE 152) AmaHy_arrow1_Scaffold_8 - View
Amaranthus hybridus Ah.15g092080 Nuclear transcription factor Y subunit B-8 (AtNF-YB-8) AmaHy_arrow1_Scaffold_15 + View
Arabidopsis thaliana AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit. HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G03100.1)%3B Has 43769 Blast hits to 13527 proteins in 285 species: Archae - 3%3B Bacteria - 26%3B Metazoa - 343%3B Fungi - 654%3B Plants - 41314%3B Viruses - 0%3B Other Eukaryotes - 1429 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G02950 Tudor/PWWP/MBT superfamily protein Tudor/PWWP/MBT superfamily protein%3B CONTAINS InterPro DOMAIN/s: PWWP (InterPro:IPR000313)%3B BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT3G09670.2)%3B Has 1812 Blast hits to 1531 proteins in 231 species: Archae - 0%3B Bacteria - 88%3B Metazoa - 662%3B Fungi - 158%3B Plants - 279%3B Viruses - 11%3B Other Eukaryotes - 614 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB05g21860 ChrB05 - View
Brassica carinata BcaC03g13040 ChrC03 - View
Brassica napus A05p39410 A05 - View
Brassica napus C02p00720 C02 + View
Brassica oleracea BolC2t06070H C2 + View
Brassica rapa BraA05t22722Z A05 - View
Brassica rapa BraA02t04737Z A02 + View
Cannabis sativa CANSAT80G1453 NC_044372.1 + View
Cicer arietinum L. Ca_11448_v3 Ca_LG4_v3 + View
Corylus avellana Haze_20651 Similar to ATM: Serine/threonine-protein kinase ATM (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_16938 Similar to ATM: Serine/threonine-protein kinase ATM (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc09_g02640 Putative Tudor/PWWP/MBT superfamily protein chr9 + View
Coffea canephora Cc06_g03530 Pentatricopeptide repeat-containing protein At3g09650, chloroplastic chr6 + View
Citrus clementina Ciclev10010946m.g scaffold_6 - View
Citrus clementina Ciclev10030525m.g scaffold_4 + View
Ceratophyllum demersum CDE02G3211 1 - View
Carpinus fangiana Cfa001590 Cfa01 + View
Carpinus fangiana Cfa017505 Cfa07 + View
Cardamine hirsuta CARHR210340 PWWP domain-containing protein Chr6 - View
Cardamine hirsuta CARHR084060 Pentatricopeptide repeat-containing protein, putative Chr3 + View
Carya illinoinensis CiPaw.09G180000 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Chr09 - View
Carya illinoinensis CiPaw.02G176700 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Chr02 - View
Citrullus lanatus ClCG02G013880 PWWP domain-containing protein CG_Chr02 + View
Cucumis melo MELO3C011728.2 Serine/threonine-protein kinase ATM chr10 - View
Cucumis melo MELO3C009312.2 Pentatricopeptide repeat-containing protein At3g09650, chloroplastic chr04 - View
Corchorus olitorius COL.COLO4_27083 Tudor/PWWP/MBT superfamily protein AWUE01019427.1 - View
Chenopodium quinoa AUR62040020 glyr1: Putative oxidoreductase GLYR1 C_Quinoa_Scaffold_4471 + View
Capsella rubella Carub.0003s0874 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_3 + View
Capsella rubella Carub.0006s0175 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED scaffold_6 + View
Cucumis sativus L. CsaV3_5G006280 Tudor/PWWP/MBT superfamily protein chr5 - View
Cucumis sativus L. CsaV3_3G035530 Pentatricopeptide repeat-containing protein chr3 + View
Daucus carota DCAR_014961 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_009287 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv35708 GWHABJS00000015 + View
Davidia involucrata Dinv31338 GWHABJS00000004 + View
Durio zibethinus Duzib114G0150 NW_019167926.1 + View
Durio zibethinus Duzib128G0638 NW_019168481.1 - View
Durio zibethinus Duzib093G2126 NW_019167937.1 - View
Erigeron canadensis ECA238G0798 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA233G6194 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.K03209 Chr11 + View
Eucalyptus grandis Eucgr.G02799 Chr07 + View
Erythranthe guttata Migut.L01658 scaffold_12 + View
Erythranthe guttata Migut.J00415 scaffold_10 + View
Eutrema salsugineum Thhalv10015666m.g PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN scaffold_2 + View
Eutrema salsugineum Thhalv10020687m.g PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN scaffold_13 - View
Fragaria x ananassa FAN05G1887 PTHR22981//PTHR22981:SF71 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // PWWP DOMAIN-CONTAINING PROTEIN Fvb6-3 - View
Fragaria x ananassa FAN03G2424 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Fvb7-3 + View
Fragaria x ananassa FAN02G3427 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb6-4 + View
Fragaria x ananassa FAN01G0071 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Fvb7-4 + View
Fragaria x ananassa FAN09G3879 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN14G3376 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria vesca FvH4_6g15290 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb6 + View
Gossypium hirsutum Gohir.D09G147800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D09 - View
Gossypium hirsutum Gohir.D01G206000 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED D01 - View
Gossypium hirsutum Gohir.A05G344100 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.A01G217300 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED A01 - View
Gossypium hirsutum Gohir.A09G152200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A09 - View
Glycine max Glyma.13G137000 PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN Gm13 + View
Glycine max Glyma.10G049200 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm10 + View
Gossypium raimondii Gorai.006G168900 Chr06 - View
Gossypium raimondii Gorai.002G250400 Chr02 - View
Helianthus annuus HanXRQChr14g0454621 Probable tetratricopeptide repeat (TPR)-like superfamily protein HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0111F.1_g053850 Hma1.2p1_0111F.1 + View
Lupinus albus Lalb_Chr02g0153641 PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr02 + View
Lupinus albus Lalb_Chr06g0171381 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lalb_Chr06 + View
Lupinus albus Lalb_Chr21g0314651 PTHR22981:SF71 - PWWP DOMAIN-CONTAINING PROTEIN Lalb_Chr21 + View
Lotus japonicus Lj5g0028198 PTHR22981//PTHR22981:SF71 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // PWWP DOMAIN-CONTAINING PROTEIN chr5 - View
Lonicera japonica Lj2P107T25 GWHAAZE00000002 + View
Lonicera japonica Lj3C979T7 GWHAAZE00000003 + View
Lonicera japonica Lj1C924G11 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_2_109641 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_6_29660 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Lsat_1_v8_lg_6 - View
Malus domestica MD12G1124400 Tudor/PWWP/MBT superfamily protein Chr12 - View
Malus domestica MD07G1179800 dentin sialophosphoprotein-related Chr07 - View
Manihot esculenta Manes.08G003100 Chromosome08 + View
Manihot esculenta Manes.10G041700 Chromosome10 + View
Medicago truncatula Medtr1g066890 PWWP domain protein chr1 - View
Nelumbo nucifera Nn2g12986 chr2 + View
Nicotiana tabacum Nitab4.5_0001142g0070 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0001142 - View
Olea europaea Oeu035143.1 chr11 - View
Olea europaea Oeu060084.1 scaffold83 + View
Petunia axillaris Peaxi162Scf00005g00472 Pentatricopeptide repeat-containing protein Peaxi162Scf00005 - View
Punica granatum PGR142G0989 NC_045128.1 + View
Punica granatum PGR044G1213 NC_045134.1 - View
Punica granatum PGR004G1993 NC_045131.1 + View
Prunus persica Prupe.2G219200 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Pp02 - View
Prunus persica Prupe.6G241400 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Pp06 - View
Pisum sativum Psat6g070600 PWWP domain chr6LG2 - View
Papaver somniferum PSO339G4758 NC_039366.1 - View
Populus trichocarpa Potri.010G216900 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Chr10 + View
Populus trichocarpa Potri.006G131800 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Chr06 - View
Populus trichocarpa Potri.008G044600 PTHR22981//PTHR22981:SF73 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Chr08 - View
Populus trichocarpa Potri.016G085300 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr16 + View
Phaseolus vulgaris Phvul.007G163500 PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr07 + View
Quercus lobata QL07p045288 7 - View
Quercus lobata QL08p056900 8 - View
Rhododendron simsii RhsimUnG0118400 ctg309 - View
Striga asiatica SGA_v2.0_scaffold94G28666 scaffold94 + View
Salvia bowleyana SalBow3G1712 GWHASIU00000006 + View
Salvia bowleyana SalBow4G3302 GWHASIU00000008 + View
Salix brachista Sabra06G0103400 GWHAAZH00000006 - View
Salix brachista Sabra08G0030900 GWHAAZH00000008 - View
Salix brachista Sabra16G0092100 GWHAAZH00000016 + View
Salix brachista Sabra10G0167800 GWHAAZH00000010 + View
Simmondsia chinensis Sc20g0004090 GWHAASQ00000020 - View
Simmondsia chinensis Sc07g0006250 GWHAASQ00000007 + View
Sechium edule Sed0014953 LG07 - View
Sechium edule Sed0017477 LG02 + View
Sechium edule Sed0010715 LG04 + View
Solanum lycopersicum Solyc09g007320.4 Pentatricopeptide repeat (AHRD V3.3 *** A0A200R629_9MAGN) SL4.0ch09 + View
Solanum pennellii Sopen09g002180 RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit. | HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400036874 Conserved gene of unknown function ST4.03ch09 - View
Selenicereus undatus Hund20160 Scaffold_33673 + View
Trochodendron aralioides TAR623G1395 group7 - View
Trochodendron aralioides TAR633G0412 group2 + View
Theobroma cacao Thecc.05G053600 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_5 + View
Theobroma cacao Thecc.10G067400 Tudor/PWWP/MBT superfamily protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104826984 uncharacterized protein LOC104826984 NW_010967707.1 - View
Tripterygium wilfordii TWI74G1097 NC_052234.1 + View
Tripterygium wilfordii TWI53G0567 NC_052244.1 - View
Vaccinium macrocarpon vmacro20062 Similar to GLYR1: Putative oxidoreductase GLYR1 (Gallus gallus OX%3D9031) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0832 CM024071.1 - View
Vitis vinifera GSVIVG01025536001 chr8 + View
Vitis vinifera GSVIVG01025624001 chr8 - View
Vitis vinifera GSVIVG01016344001 chr13 + View