Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G6500 | LG-4 | + | View | |
Acer truncatum | Atru.chr13.73 | chr13 | + | View | |
Actinidia chinensis | Actinidia17069 | Lachesis_group28 | + | View | |
Arabidopsis lyrata | AL2G36530 | scaffold_2 | - | View | |
Aquilegia oxysepala | Aqoxy5G00963 | CHR05 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.GPRR9Y | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.KK00U0 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | arahy.Tifrunner.gnm1.Arahy.08 | - | View |
Arabidopsis thaliana | AT1G76420 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein Identified in an enhancer trap line%3B member of the NAC family of proteins. Expressed at the boundary between the shoot meristem and lateral organs and the polar nuclei in the embryo sac. CUP SHAPED COTYLEDON3 (CUC3)%3B CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441)%3B BEST Arabidopsis thaliana protein match is: NAC domain containing protein 38 (TAIR:AT2G24430.2)%3B Has 3010 Blast hits to 3003 proteins in 77 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 3005%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). | Chr1 | - | View |
Amborella trichopoda | ATR0605G015 | AmTr_v1.0_scaffold00022 | - | View | |
Brassica carinata | BcaC08g47252 | ChrC08 | + | View | |
Brassica carinata | BcaC08g47140 | ChrC08 | - | View | |
Brassica napus | C06p50620 | C06 | - | View | |
Brassica napus | A07p42050 | A07 | - | View | |
Brassica napus | A02p20690 | A02 | - | View | |
Brassica napus | C02p33040 | C02 | + | View | |
Brassica oleracea | BolC6t40087H | C6 | - | View | |
Brassica oleracea | BolC2t09392H | C2 | - | View | |
Brassica rapa | BraA07t31735Z | A07 | - | View | |
Cannabis sativa | CANSAT25G2845 | NC_044370.1 | + | View | |
Cicer arietinum L. | Ca_15388_v3 | Ca_LG5_v3 | + | View | |
Corylus avellana | Haze_22852 | Similar to At2g32630: Pentatricopeptide repeat-containing protein At2g32630 (Arabidopsis thaliana OX%3D3702) | 3 | - | View |
Citrus clementina | Ciclev10001403m.g | scaffold_5 | - | View | |
Cardamine hirsuta | CARHR069980 | NAC domain protein, | Chr2 | - | View |
Carya illinoinensis | CiPaw.08G076900 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Chr08 | - | View |
Citrullus lanatus | ClCG11G018980 | NAC domain-containing protein | CG_Chr11 | - | View |
Cucumis melo | MELO3C017052.2 | protein CUP-SHAPED COTYLEDON 3-like | chr07 | + | View |
Chenopodium quinoa | AUR62024101 | NAC031: Protein CUP-SHAPED COTYLEDON 3 | C_Quinoa_Scaffold_4119 | + | View |
Capsella rubella | Carub.0002s2333 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | scaffold_2 | - | View |
Cucumis sativus L. | CsaV3_4G037580 | NAC domain containing protein | chr4 | - | View |
Daucus carota | DCAR_016795 | hypothetical protein | DCARv2_Chr5 | - | View |
Daucus carota | DCAR_013939 | hypothetical protein | DCARv2_Chr4 | + | View |
Erigeron canadensis | ECA232G1792 | Conyza_canadensis_scaffold:2 | + | View | |
Eucalyptus grandis | Eucgr.F03588 | Chr06 | - | View | |
Erythranthe guttata | Migut.N02983 | scaffold_14 | - | View | |
Eutrema salsugineum | Thhalv10019493m.g | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | scaffold_9 | + | View |
Fragaria x ananassa | FAN04G0372 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Fvb5-4 | - | View |
Fragaria vesca | FvH4_5g25960 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Fvb5 | - | View |
Gossypium hirsutum | Gohir.A01G102200 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | A01 | + | View |
Glycine max | Glyma.04G014900 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Gm04 | + | View |
Glycine max | Glyma.06G014900 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Gm06 | + | View |
Lotus japonicus | Lj1g0002562 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | chr1 | + | View |
Magnolia biondii | MBI01_g01374_MAGBIO | AED:0.13 | Chr01 | + | View |
Malus domestica | MD06G1004900 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | Chr06 | + | View |
Manihot esculenta | Manes.05G126800 | Chromosome05 | + | View | |
Manihot esculenta | Manes.18G002500 | Chromosome18 | + | View | |
Medicago truncatula | Medtr3g116070 | CUP-shaped cotyledon-like protein | chr3 | - | View |
Nicotiana tabacum | Nitab4.5_0001756g0080 | NAC domain | Nitab4.5_0001756 | + | View |
Olea europaea | Oeu013564.1 | scaffold1534 | - | View | |
Petunia axillaris | Peaxi162Scf00680g00630 | NAC domain containing protein 100 | Peaxi162Scf00680 | - | View |
Punica granatum | PGR031G0100 | NC_045127.1 | - | View | |
Prunus persica | Prupe.5G006200 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Pp05 | + | View |
Populus trichocarpa | Potri.002G005800 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Chr02 | + | View |
Populus trichocarpa | Potri.005G255900 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Chr05 | - | View |
Phaseolus vulgaris | Phvul.009G008000 | PTHR31744:SF17 - PROTEIN CUP-SHAPED COTYLEDON 3 | Chr09 | - | View |
Quercus lobata | QL02p015462 | CM012294 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr7g0216521 | RcHm_v2.0_Chr7 | - | View | |
Rhododendron simsii | Rhsim07G0257500 | chr07 | - | View | |
Rhododendron simsii | Rhsim06G0003800 | chr06 | + | View | |
Salix brachista | Sabra05G0198100 | GWHAAZH00000005 | - | View | |
Simmondsia chinensis | Sc02g0009250 | GWHAASQ00000002 | - | View | |
Sapria himalayana | SHI07957 | scaffold7_18583372 | + | View | |
Schrenkiella parvula | Sp5g31580 | PTHR31744//PTHR31744:SF17 - FAMILY NOT NAMED // PROTEIN CUP-SHAPED COTYLEDON 3 | ch5-7 | - | View |
Solanum tuberosum | PGSC0003DMG400009920 | CUP-SHAPED COTYLEDON3 | ST4.03ch04 | + | View |
Selenicereus undatus | Hund01839 | Scaffold_33678 | + | View | |
Trochodendron aralioides | TAR376G0044 | group14 | - | View | |
Theobroma cacao | Thecc.08G100600 | NAC domain transcriptional regulator superfamily protein | Chromosome_8 | + | View |
Tarenaya hassleriana | THA.LOC104812002 | protein CUP-SHAPED COTYLEDON 3 | NW_010965372.1 | - | View |
Tarenaya hassleriana | THA.LOC104813740 | protein CUP-SHAPED COTYLEDON 3-like | NW_010965373.1 | + | View |
Trifolium pratense | TPR.G38198 | Tp57577_TGAC_v2_LG7 | - | View | |
Tripterygium wilfordii | TWI12G1421 | NC_052243.1 | + | View | |
Tripterygium wilfordii | TWI36G1351 | NC_052237.1 | - | View | |
Vaccinium macrocarpon | vmacro21774 | Similar to NAC031: Protein CUP-SHAPED COTYLEDON 3 (Arabidopsis thaliana OX%3D3702) | chr10_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vaccinium macrocarpon | vmacro04424 | Similar to NAC031: Protein CUP-SHAPED COTYLEDON 3 (Arabidopsis thaliana OX%3D3702) | chr12_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1309G1916 | CM024072.1 | - | View | |
Vitis vinifera | GSVIVG01013419001 | chr18 | + | View |