Gene: PGSC0003DMG400009920
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400009920
- Transcript Identifier PGSC0003DMT400025690
- Gene Type Coding gene
- Location ST4.03ch04 : 71879040-71881602 : positive
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000302
- #Genes/#Species 1157/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37473716
- id PGSC0003DMG400009920.v4.03
- uniprot M1ALV6
Descriptions
- Description CUP-SHAPED COTYLEDON3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048527 | ISO | PLAZA Integrative Orthology | lateral root development | AT3G15170 |
| GO:0010014 | ISO | PLAZA Integrative Orthology | meristem initiation | AT3G15170 |
| GO:0010223 | ISO | PLAZA Integrative Orthology | secondary shoot formation | AT3G15170 |
| GO:0010199 | ISO | PLAZA Integrative Orthology | organ boundary specification between lateral organs and the meristem | AT1G76420 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT3G15170 |
| GO:0051782 | ISO | PLAZA Integrative Orthology | negative regulation of cell division | AT3G15170 |
| GO:0048467 | ISO | PLAZA Integrative Orthology | gynoecium development | AT3G15170 |
| GO:0090691 | ISO | PLAZA Integrative Orthology | formation of plant organ boundary | AT3G15170 |
| GO:0010072 | ISO | PLAZA Integrative Orthology | primary shoot apical meristem specification | AT3G15170 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G15170 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G76420 |
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT3G15170 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G15170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |