Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C03p04470 C03 - View
A03p04000 A03 - View
A10p28140 A10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G17940 LG-3 + View
Arabidopsis lyrata AL6G19310 scaffold_6 - View
Arabidopsis thaliana AT5G08580 Calcium-binding EF hand family protein Calcium-binding EF hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB08g37242 ChrB08 + View
Brassica carinata BcaB01g05580 ChrB01 + View
Brassica oleracea BolC3t12978H C3 - View
Brassica oleracea BolC9t59582H C9 + View
Brassica rapa BraA10t44863Z A10 + View
Brassica rapa BraA03t09743Z A03 - View
Cardamine hirsuta CARHR204380 Calcium-binding EF hand family protein Chr6 + View
Capsella rubella Carub.0006s0755 PTHR10827:SF52 - IP16409P scaffold_6 - View
Eutrema salsugineum Thhalv10013753m.g PTHR10827:SF52 - IP16409P scaffold_2 - View
Gossypium hirsutum Gohir.A13G062300 PF10591 - Secreted protein acidic and rich in cysteine Ca binding region (SPARC_Ca_bdg) A13 + View
Schrenkiella parvula Sp6g34280 PTHR10827//PTHR10827:SF52 - RETICULOCALBIN // IP16409P ch6-6 + View
Tarenaya hassleriana THA.LOC104819359 reticulocalbin-2-like NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104818403 reticulocalbin-2 NW_010966092.1 - View