Gene: AT5G08580

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G08580
  • Transcript Identifier AT5G08580.1
  • Gene Type Coding gene
  • Location Chr5 : 2780976-2782961 : negative

Gene Family Information

  • ID HOM05D002707
  • #Genes/#Species 254/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G08580.1
  • uniprot Q9FNN0

Descriptions

  • Description Calcium-binding EF hand family protein
  • Computational description Calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048); BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT4G27790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IBA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus2
GO:0005783
IDA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
IBA
Gene Ontologyendoplasmic reticulum1 3
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
35.1 not assigned.annotated