Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
C04p38090 C04 - View
A09p47370 A09 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL5G35470 scaffold_5 + View
Arabidopsis thaliana AT3G54420 homolog of carrot EP3-3 chitinase encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid%2C but not in endosperm and integuments as in carrot. Post-embryonically%2C expression is found in hydathodes%2C stipules%2C root epidermis and emerging root hairs. homolog of carrot EP3-3 chitinase (EP3)%3B FUNCTIONS IN: chitinase activity%3B INVOLVED IN: somatic embryogenesis%2C plant-type hypersensitive response%3B LOCATED IN: cell wall%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Chitin-binding%2C type 1%2C conserved site (InterPro:IPR018371)%2C Glycoside hydrolase%2C family 19 (InterPro:IPR016283)%2C Chitin-binding%2C type 1 (InterPro:IPR001002)%2C Glycoside hydrolase%2C family 19%2C catalytic (InterPro:IPR000726)%3B BEST Arabidopsis thaliana protein match is: Chitinase family protein (TAIR:AT2G43590.1)%3B Has 2660 Blast hits to 2432 proteins in 504 species: Archae - 0%3B Bacteria - 547%3B Metazoa - 34%3B Fungi - 178%3B Plants - 1776%3B Viruses - 22%3B Other Eukaryotes - 103 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB01g00194 ChrB01 - View
Brassica oleracea BolC8t50566H C8 + View
Brassica rapa BraA09t40198Z A09 + View
Cardamine hirsuta CARHR164320 Chitinase Chr5 + View
Capsella rubella Carub.0005s2102 PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED scaffold_5 + View
Eutrema salsugineum Thhalv10010625m.g PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED scaffold_16 - View
Schrenkiella parvula Sp5g08000 PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED ch5-1 - View